Genome Explorer: Gardnerella vaginalis UMB1350 (SEQF7993.1)
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NCBI Annotation for SEQF7993.1
| Genome selected: Gardnerella vaginalis UMB1350 | |||
| Contigs: | 12 | Bases: | 1502805 bps |
| CDS: | 14 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1001 | JABUHB010000004.1 | NSX45151.1 JB | 765 [NA] | 254 [AA] | 84819-85583 | HRR06_05295 | DUF3710 domain-containing protein |
| 1002 | JABUHB010000004.1 | NSX45152.1 JB | 687 [NA] | 228 [AA] | 85728-86414 | HRR06_05300 | DUF3159 domain-containing protein |
| 1003 | JABUHB010000004.1 | NSX45153.1 JB | 1401 [NA] | 466 [AA] | 86452-87852 | HRR06_05305 | class I SAM-dependent RNA methyltransferase |
| 1004 | JABUHB010000004.1 | NSX45154.1 JB | 1173 [NA] | 390 [AA] | 88241-89413 | HRR06_05310 | ATP-binding protein |
| 1005 | JABUHB010000004.1 | NSX45155.1 JB | 645 [NA] | 214 [AA] | 89744-90388 | HRR06_05315 | helix-turn-helix transcriptional regulator |
| 1006 | JABUHB010000004.1 | NSX45156.1 JB | 765 [NA] | 254 [AA] | 90759-91523 | HRR06_05320 | ABC transporter permease |
| 1007 | JABUHB010000004.1 | NSX45157.1 JB | 726 [NA] | 241 [AA] | 91537-92262 | HRR06_05325 | ABC transporter permease |
| 1008 | JABUHB010000004.1 | NSX45158.1 JB | 765 [NA] | 254 [AA] | 92259-93023 | HRR06_05330 | ABC transporter ATP-binding protein |
| 1009 | JABUHB010000004.1 | NSX45159.1 JB | 235 [NA] | 78 [AA] | 93163->93397 | HRR06_05335 | response regulator |
| 1010 | JABUHB010000005.1 | NSX45160.1 JB | 816 [NA] | 271 [AA] | 236-1051 | HRR06_05340 | HD domain-containing protein |
| 1011 | JABUHB010000005.1 | NSX45161.1 JB | 2634 [NA] | 877 [AA] | 1075-3708 | HRR06_05345 | KUP/HAK/KT family potassium transporter |
| 1012 | JABUHB010000005.1 | NSX45162.1 JB | 981 [NA] | 326 [AA] | 3873-4853 | HRR06_05350 | TatD family hydrolase |
| 1013 | JABUHB010000005.1 | NSX45163.1 JB | 1797 [NA] | 598 [AA] | 4908-6704 | HRR06_05355 | ABC transporter ATP-binding protein |
| 1014 | JABUHB010000005.1 | NSX45164.1 JB | 1815 [NA] | 604 [AA] | 6707-8521 | HRR06_05360 | ABC transporter ATP-binding protein |
| 1015 | JABUHB010000005.1 | NSX45165.1 JB | 1743 [NA] | 580 [AA] | 8701-10443 | HRR06_05365 | ABC transporter family substrate-binding protein |
| 1016 | JABUHB010000005.1 | NSX45166.1 JB | 1890 [NA] | 629 [AA] | 10767-12656 | HRR06_05370 | ABC transporter ATP-binding protein |
| 1017 | JABUHB010000005.1 | NSX45167.1 JB | 948 [NA] | 315 [AA] | 12678-13625 | HRR06_05375 | ABC transporter permease |
| 1018 | JABUHB010000005.1 | NSX45168.1 JB | 984 [NA] | 327 [AA] | 13650-14633 | HRR06_05380 | ABC transporter permease |
| 1019 | JABUHB010000005.1 | NSX45169.1 JB | 1443 [NA] | 480 [AA] | 15196-16638 | HRR06_05385 | C1 family peptidase |
| 1020 | JABUHB010000005.1 | NSX45170.1 JB | 1872 [NA] | 623 [AA] | 16984-18855 | HRR06_05390 | methionine--tRNA ligase |
| 1021 | JABUHB010000005.1 | NSX45171.1 JB | 627 [NA] | 208 [AA] | 19160-19786 | HRR06_05395 | hypothetical protein |
| 1022 | JABUHB010000005.1 | NSX45172.1 JB | 264 [NA] | 87 [AA] | 19777-20040 | HRR06_05400 | hypothetical protein |
| 1023 | JABUHB010000005.1 | NSX45173.1 JB | 903 [NA] | 300 [AA] | 20076-20978 | HRR06_05405 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase |
| 1024 | JABUHB010000005.1 | NSX45174.1 JB | 843 [NA] | 280 [AA] | 21108-21950 | HRR06_05410 | alpha/beta hydrolase |
| 1025 | JABUHB010000005.1 | NSX45175.1 JB | 1518 [NA] | 505 [AA] | 22166-23683 | HRR06_05415 | formate--tetrahydrofolate ligase |
| 1026 | JABUHB010000005.1 | NSX45176.1 JB | 1608 [NA] | 535 [AA] | 23912-25519 | HRR06_05420 | C69 family dipeptidase |
| 1027 | JABUHB010000005.1 | NSX45177.1 JB | 552 [NA] | 183 [AA] | 25631-26182 | HRR06_05425 | YbhB/YbcL family Raf kinase inhibitor-like protein |
| 1028 | JABUHB010000005.1 | NSX45178.1 JB | 1533 [NA] | 510 [AA] | 26406-27938 | HRR06_05430 | PTS ascorbate transporter subunit IIC |
| 1029 | JABUHB010000005.1 | NSX45179.1 JB | 270 [NA] | 89 [AA] | 28055-28324 | HRR06_05435 | PTS sugar transporter subunit IIB |
| 1030 | JABUHB010000005.1 | NSX45180.1 JB | 450 [NA] | 149 [AA] | 28388-28837 | HRR06_05440 | PTS sugar transporter subunit IIA |
| 1031 | JABUHB010000005.1 | NSX45181.1 JB | 1659 [NA] | 552 [AA] | 28942-30600 | HRR06_05445 | phosphoenolpyruvate--protein phosphotransferase |
| 1032 | JABUHB010000005.1 | NSX45182.1 JB | 267 [NA] | 88 [AA] | 30876-31142 | HRR06_05450 | HPr family phosphocarrier protein |
| 1033 | JABUHB010000005.1 | NSX45183.1 JB | 1080 [NA] | 359 [AA] | 31242-32321 | HRR06_05455 | LacI family DNA-binding transcriptional regulator |
| 1034 | JABUHB010000005.1 | NSX45184.1 JB | 1179 [NA] | 392 [AA] | 32334-33512 | HRR06_05460 | DNA polymerase III subunit delta' |
| 1035 | JABUHB010000005.1 | NSX45185.1 JB | 705 [NA] | 234 [AA] | 33567-34271 | HRR06_05465 | dTMP kinase |
| 1036 | JABUHB010000005.1 | NSX45186.1 JB | 2856 [NA] | 951 [AA] | 34320-37175 | HRR06_05470 | type I DNA topoisomerase |
| 1037 | JABUHB010000005.1 | NSX45187.1 JB | 1308 [NA] | 435 [AA] | 37307-38614 | HRR06_05475 | phosphatase PAP2 family protein |
| 1038 | JABUHB010000005.1 | NSX45188.1 JB | 1143 [NA] | 380 [AA] | 38798-39940 | HRR06_05485 | inositol-3-phosphate synthase |
| 1039 | JABUHB010000005.1 | NSX45189.1 JB | 2325 [NA] | 774 [AA] | 40113-42437 | HRR06_05490 | penicillin-binding protein |
| 1040 | JABUHB010000005.1 | NSX45190.1 JB | 744 [NA] | 247 [AA] | 42566-43309 | HRR06_05495 | HAD family phosphatase |
| 1041 | JABUHB010000005.1 | NSX45191.1 JB | 597 [NA] | 198 [AA] | 43485-44081 | HRR06_05500 | MerR family transcriptional regulator |
| 1042 | JABUHB010000005.1 | NSX45192.1 JB | 1053 [NA] | 350 [AA] | 44169-45221 | HRR06_05505 | J domain-containing protein |
| 1043 | JABUHB010000005.1 | NSX45193.1 JB | 696 [NA] | 231 [AA] | 45348-46043 | HRR06_05510 | nucleotide exchange factor GrpE |
| 1044 | JABUHB010000005.1 | NSX45194.1 JB | 1884 [NA] | 627 [AA] | 46043-47926 | HRR06_05515 | molecular chaperone DnaK |
| 1045 | JABUHB010000005.1 | NSX45195.1 JB | 732 [NA] | 243 [AA] | 48194-48925 | HRR06_05520 | HesA/MoeB/ThiF family protein |
| 1046 | JABUHB010000005.1 | NSX45196.1 JB | 813 [NA] | 270 [AA] | 48962-49774 | HRR06_05525 | thiazole synthase |
| 1047 | JABUHB010000005.1 | NSX45197.1 JB | 207 [NA] | 68 [AA] | 49864-50070 | HRR06_05530 | sulfur carrier protein ThiS |
| 1048 | JABUHB010000005.1 | NSX45198.1 JB | 1071 [NA] | 356 [AA] | 50193-51263 | HRR06_05535 | glycine oxidase ThiO |
| 1049 | JABUHB010000005.1 | NSX45199.1 JB | 2694 [NA] | 897 [AA] | 52031-54724 | HRR06_05540 | alpha-glucosidase |
| 1050 | JABUHB010000005.1 | NSX45200.1 JB | 852 [NA] | 283 [AA] | 54905-55756 | HRR06_05545 | carbohydrate ABC transporter permease |
| 1051 | JABUHB010000005.1 | NSX45201.1 JB | 936 [NA] | 311 [AA] | 55813-56748 | HRR06_05550 | sugar ABC transporter permease |
| 1052 | JABUHB010000005.1 | NSX45202.1 JB | 1386 [NA] | 461 [AA] | 56796-58181 | HRR06_05555 | extracellular solute-binding protein |
| 1053 | JABUHB010000005.1 | NSX45203.1 JB | 1026 [NA] | 341 [AA] | 58455-59480 | HRR06_05560 | LacI family DNA-binding transcriptional regulator |
| 1054 | JABUHB010000005.1 | NSX45204.1 JB | 780 [NA] | 259 [AA] | 59629-60408 | HRR06_05565 | endonuclease VII |
| 1055 | JABUHB010000005.1 | NSX45205.1 JB | 1701 [NA] | 566 [AA] | 60543-62243 | HRR06_05570 | alpha-amylase |
| 1056 | JABUHB010000005.1 | NSX45206.1 JB | 1230 [NA] | 409 [AA] | 62502-63731 | HRR06_05575 | extracellular solute-binding protein |
| 1057 | JABUHB010000005.1 | NSX45207.1 JB | 1407 [NA] | 468 [AA] | 63891-65297 | HRR06_05580 | sugar ABC transporter permease |
| 1058 | JABUHB010000005.1 | NSX45208.1 JB | 924 [NA] | 307 [AA] | 65294-66217 | HRR06_05585 | sugar ABC transporter permease |
| 1059 | JABUHB010000005.1 | NSX45209.1 JB | 2010 [NA] | 669 [AA] | 66528-68537 | HRR06_05590 | type I pullulanase |
| 1060 | JABUHB010000005.1 | NSX45210.1 JB | 2250 [NA] | 749 [AA] | 68816-71065 | HRR06_05595 | 4-alpha-glucanotransferase |
| 1061 | JABUHB010000005.1 | NSX45211.1 JB | 612 [NA] | 203 [AA] | 71249-71860 | HRR06_05600 | DUF624 domain-containing protein |
| 1062 | JABUHB010000005.1 | NSX45212.1 JB | 834 [NA] | 277 [AA] | 72049-72882 | HRR06_05605 | carbohydrate ABC transporter permease |
| 1063 | JABUHB010000005.1 | NSX45213.1 JB | 852 [NA] | 283 [AA] | 72879-73730 | HRR06_05610 | sugar ABC transporter permease |
| 1064 | JABUHB010000005.1 | NSX45214.1 JB | 1014 [NA] | 337 [AA] | 74033-75046 | HRR06_05615 | LacI family DNA-binding transcriptional regulator |
| 1065 | JABUHB010000005.1 | NSX45215.1 JB | 1344 [NA] | 447 [AA] | 75209-76552 | HRR06_05620 | ABC transporter substrate-binding protein |
| 1066 | JABUHB010000005.1 | NSX45216.1 JB | 711 [NA] | 236 [AA] | 76913-77623 | HRR06_05625 | histidine phosphatase family protein |
| 1067 | JABUHB010000005.1 | NSX45217.1 JB | 459 [NA] | 152 [AA] | 77793-78251 | HRR06_05630 | DUF4235 domain-containing protein |
| 1068 | JABUHB010000005.1 | NSX45218.1 JB | 807 [NA] | 268 [AA] | 78296-79102 | HRR06_05635 | nitroreductase family protein |
| 1069 | JABUHB010000005.1 | NSX45219.1 JB | 258 [NA] | 85 [AA] | 79138-79395 | HRR06_05640 | hypothetical protein |
| 1070 | JABUHB010000005.1 | NSX45220.1 JB | 1545 [NA] | 514 [AA] | 79715-81259 | HRR06_05645 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
| 1071 | JABUHB010000005.1 | NSX45221.1 JB | 1263 [NA] | 420 [AA] | 81395-82657 | HRR06_05650 | MFS transporter |
| 1072 | JABUHB010000005.1 | NSX45222.1 JB | 525 [NA] | 174 [AA] | 82702-83226 | HRR06_05655 | hypothetical protein |
| 1073 | JABUHB010000005.1 | NSX45223.1 JB | 1212 [NA] | 403 [AA] | 83254-84465 | HRR06_05660 | ABC transporter permease |
| 1074 | JABUHB010000005.1 | NSX45224.1 JB | 711 [NA] | 236 [AA] | 84449-85159 | HRR06_05665 | ABC transporter ATP-binding protein |
| 1075 | JABUHB010000005.1 | NSX45225.1 JB | 903 [NA] | 300 [AA] | 85156-86058 | HRR06_05670 | efflux RND transporter periplasmic adaptor subunit |
| 1076 | JABUHB010000005.1 | NSX45226.1 JB | 672 [NA] | 223 [AA] | 86534-87205 | HRR06_05675 | response regulator transcription factor |
| 1077 | JABUHB010000005.1 | NSX45227.1 JB | 1161 [NA] | 386 [AA] | 87202-88362 | HRR06_05680 | histidine kinase |
| 1078 | JABUHB010000005.1 | NSX45228.1 JB | 372 [NA] | 123 [AA] | 88524-88895 | HRR06_05685 | hypothetical protein |
| 1079 | JABUHB010000005.1 | NSX45229.1 JB | 255 [NA] | 84 [AA] | 89076-89330 | HRR06_05690 | XRE family transcriptional regulator |
| 1080 | JABUHB010000005.1 | NSX45230.1 JB | 720 [NA] | 239 [AA] | 89448-90167 | HRR06_05695 | nitroreductase family protein |
| 1081 | JABUHB010000006.1 | NSX45231.1 JB | 1251 [NA] | 416 [AA] | 279-1529 | HRR06_05700 | hypothetical protein |
| 1082 | JABUHB010000006.1 | NSX45232.1 JB | 555 [NA] | 184 [AA] | 2550-3104 | HRR06_05710 | cysteine hydrolase |
| 1083 | JABUHB010000006.1 | NSX45233.1 JB | 2319 [NA] | 772 [AA] | 3333-5651 | HRR06_05715 | cell surface protein |
| 1084 | JABUHB010000006.1 | NSX45234.1 JB | 1203 [NA] | 400 [AA] | 5686-6888 | HRR06_05720 | cell surface protein |
| 1085 | JABUHB010000006.1 | NSX45235.1 JB | 2196 [NA] | 731 [AA] | 6902-9097 | HRR06_05725 | ABC transporter |
| 1086 | JABUHB010000006.1 | NSX45236.1 JB | 1779 [NA] | 592 [AA] | 9116-10894 | HRR06_05730 | anchored repeat ABC transporter, substrate-binding protein |
| 1087 | JABUHB010000006.1 | NSX45237.1 JB | 789 [NA] | 262 [AA] | 10915-11703 | HRR06_05735 | anchored repeat-type ABC transporter ATP-binding subunit |
| 1088 | JABUHB010000006.1 | NSX45238.1 JB | 864 [NA] | 287 [AA] | 11703-12566 | HRR06_05740 | anchored repeat-type ABC transporter permease subunit |
| 1089 | JABUHB010000006.1 | NSX45239.1 JB | 885 [NA] | 294 [AA] | 12587-13471 | HRR06_05745 | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
| 1090 | JABUHB010000006.1 | NSX45240.1 JB | 996 [NA] | 331 [AA] | 13613-14608 | HRR06_05750 | NAD(P)-dependent glycerol-3-phosphate dehydrogenase |
| 1091 | JABUHB010000006.1 | NSX45241.1 JB | 1143 [NA] | 380 [AA] | 14681-15823 | HRR06_05755 | D-alanine--D-alanine ligase |
| 1092 | JABUHB010000006.1 | NSX45242.1 JB | 993 [NA] | 330 [AA] | 15925-16917 | HRR06_05760 | CPBP family intramembrane metalloprotease |
| 1093 | JABUHB010000006.1 | NSX45243.1 JB | 1374 [NA] | 457 [AA] | 16979-18352 | HRR06_05765 | homoserine dehydrogenase |
| 1094 | JABUHB010000006.1 | NSX45244.1 JB | 1077 [NA] | 358 [AA] | 18371-19447 | HRR06_05770 | homoserine kinase |
| 1095 | JABUHB010000006.1 | NSX45245.1 JB | 1440 [NA] | 479 [AA] | 19481-20920 | HRR06_05775 | septum formation protein Maf |
| 1096 | JABUHB010000006.1 | NSX45246.1 JB | 942 [NA] | 313 [AA] | 21142-22083 | HRR06_05780 | AEC family transporter |
| 1097 | JABUHB010000006.1 | NSX45247.1 JB | 3306 [NA] | 1101 [AA] | 22478-25783 | HRR06_05785 | Rne/Rng family ribonuclease |
| 1098 | JABUHB010000006.1 | NSX45248.1 JB | 309 [NA] | 102 [AA] | 25958-26266 | HRR06_05790 | 50S ribosomal protein L21 |
| 1099 | JABUHB010000006.1 | NSX45249.1 JB | 252 [NA] | 83 [AA] | 26300-26551 | HRR06_05795 | 50S ribosomal protein L27 |
| 1100 | JABUHB010000006.1 | NSX45250.1 JB | 1683 [NA] | 560 [AA] | 26699-28381 | HRR06_05800 | GTPase ObgE |
| 1101 | JABUHB010000006.1 | NSX45251.1 JB | 1146 [NA] | 381 [AA] | 28407-29552 | HRR06_05805 | glutamate 5-kinase |
| 1102 | JABUHB010000006.1 | NSX45252.1 JB | 1239 [NA] | 412 [AA] | 29655-30893 | HRR06_05810 | pyridoxal phosphate-dependent aminotransferase |
| 1103 | JABUHB010000006.1 | NSX45253.1 JB | 228 [NA] | 75 [AA] | 31163-31390 | HRR06_05820 | preprotein translocase subunit SecE |
| 1104 | JABUHB010000006.1 | NSX45254.1 JB | 888 [NA] | 295 [AA] | 31432-32319 | HRR06_05825 | transcription termination/antitermination factor NusG |
| 1105 | JABUHB010000006.1 | NSX45255.1 JB | 2343 [NA] | 780 [AA] | 32647-34989 | HRR06_05830 | hypothetical protein |
| 1106 | JABUHB010000006.1 | NSX45256.1 JB | 1932 [NA] | 643 [AA] | 35232-37163 | HRR06_05835 | SpaH/EbpB family LPXTG-anchored major pilin |
| 1107 | JABUHB010000006.1 | NSX45257.1 JB | 999 [NA] | 332 [AA] | 37914-38912 | HRR06_05840 | class C sortase |
| 1108 | JABUHB010000006.1 | NSX45258.1 JB | 1368 [NA] | 455 [AA] | 39099-40466 | HRR06_05845 | ATP-binding protein |
| 1109 | JABUHB010000007.1 | NSX45259.1 JB | 147 [NA] | 48 [AA] | 31-177 | HRR06_05850 | hypothetical protein |
| 1110 | JABUHB010000008.1 | NSX45260.1 JB | 1129 [NA] | 376 [AA] | <1-1129 | HRR06_05870 | HAMP domain-containing histidine kinase |
| 1111 | JABUHB010000008.1 | NSX45261.1 JB | 588 [NA] | 195 [AA] | 1136->1724 | HRR06_05875 | response regulator transcription factor |
| 1112 | JABUHB010000009.1 | NSX45262.1 JB | 975 [NA] | 324 [AA] | 38-1012 | HRR06_05880 | ORF6N domain-containing protein |
| 1113 | JABUHB010000010.1 | NSX45263.1 JB | 262 [NA] | 87 [AA] | <1-262 | HRR06_05885 | lantibiotic ABC transporter permease |
| 1114 | JABUHB010000011.1 | NSX45264.1 JB | 207 [NA] | 68 [AA] | 6-212 | HRR06_05895 | hypothetical protein |
| 1115 | JABUHB010000012.1 | NSX45265.1 JB | 317 [NA] | 105 [AA] | <1->317 | HRR06_05900 | lantibiotic ABC transporter permease |