Genome Explorer: Lactobacillus jensenii UMB1165 (SEQF5197.1)
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NCBI Annotation for SEQF5197.1
| Genome selected: Lactobacillus jensenii UMB1165 | |||
| Contigs: | 52 | Bases: | 1690640 bps |
| CDS: | 59 | rRNA: | 5 |
| tmRNA: | 1 | tRNA: | 52 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | VNGH01000032.1 | TVV13947.1 JB | 114 [NA] | 37 [AA] | 14538->14652 | FOF61_07915 | IS982 family transposase |
| 1502 | VNGH01000033.1 | TVV13902.1 JB | 1275 [NA] | 424 [AA] | 2344-3618 | FOF61_07930 | PDZ domain-containing protein |
| 1503 | VNGH01000033.1 | TVV13903.1 JB | 798 [NA] | 265 [AA] | 3697-4494 | FOF61_07935 | MBL fold metallo-hydrolase |
| 1504 | VNGH01000033.1 | TVV13904.1 JB | 804 [NA] | 267 [AA] | 4513-5316 | FOF61_07940 | hypothetical protein |
| 1505 | VNGH01000033.1 | TVV13905.1 JB | 1353 [NA] | 450 [AA] | 5320-6672 | FOF61_07945 | hypothetical protein |
| 1506 | VNGH01000033.1 | TVV13906.1 JB | 714 [NA] | 237 [AA] | 8563-9276 | FOF61_07955 | response regulator transcription factor |
| 1507 | VNGH01000033.1 | TVV13907.1 JB | 1302 [NA] | 433 [AA] | 9549-10850 | FOF61_07965 | MFS transporter |
| 1508 | VNGH01000033.1 | TVV13908.1 JB | 606 [NA] | 201 [AA] | 10862-11467 | FOF61_07970 | NAD(P)-dependent oxidoreductase |
| 1509 | VNGH01000033.1 | TVV13909.1 JB | 864 [NA] | 287 [AA] | 11589-12452 | FOF61_07975 | LysR family transcriptional regulator |
| 1510 | VNGH01000033.1 | TVV13910.1 JB | 861 [NA] | 286 [AA] | 12515-13375 | FOF61_07980 | aldo/keto reductase |
| 1511 | VNGH01000033.1 | TVV13911.1 JB | 231 [NA] | 76 [AA] | 13814-14044 | FOF61_07990 | cytochrome B5 |
| 1512 | VNGH01000033.1 | TVV13912.1 JB | 114 [NA] | 37 [AA] | 14404->14518 | FOF61_08000 | IS982 family transposase |
| 1513 | VNGH01000033.1 | TVV13913.1 JB | 480 [NA] | 159 [AA] | 1399-1878 | FOF61_07925 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH |
| 1514 | VNGH01000033.1 | TVV13914.1 JB | 1857 [NA] | 618 [AA] | 6662-8518 | FOF61_07950 | cell wall metabolism sensor histidine kinase WalK |
| 1515 | VNGH01000034.1 | TVV13881.1 JB | 1455 [NA] | 484 [AA] | 392-1846 | FOF61_08005 | DASS family sodium-coupled anion symporter |
| 1516 | VNGH01000034.1 | TVV13882.1 JB | 456 [NA] | 151 [AA] | 2316-2771 | FOF61_08010 | LysR family transcriptional regulator |
| 1517 | VNGH01000034.1 | TVV13883.1 JB | 1482 [NA] | 493 [AA] | 2886-4367 | FOF61_08015 | FAD-dependent oxidoreductase |
| 1518 | VNGH01000034.1 | TVV13884.1 JB | 978 [NA] | 325 [AA] | 4465-5442 | FOF61_08020 | LacI family transcriptional regulator |
| 1519 | VNGH01000034.1 | TVV13885.1 JB | 1014 [NA] | 337 [AA] | 5467-6480 | FOF61_08025 | LacI family transcriptional regulator |
| 1520 | VNGH01000034.1 | TVV13886.1 JB | 927 [NA] | 308 [AA] | 6680-7606 | FOF61_08030 | ribokinase |
| 1521 | VNGH01000034.1 | TVV13887.1 JB | 396 [NA] | 131 [AA] | 7606-8001 | FOF61_08035 | D-ribose pyranase |
| 1522 | VNGH01000034.1 | TVV13888.1 JB | 1479 [NA] | 492 [AA] | 8023-9501 | FOF61_08040 | sugar ABC transporter ATP-binding protein |
| 1523 | VNGH01000034.1 | TVV13889.1 JB | 987 [NA] | 328 [AA] | 10478-11464 | FOF61_08050 | D-ribose ABC transporter substrate-binding protein |
| 1524 | VNGH01000034.1 | TVV13890.1 JB | 858 [NA] | 285 [AA] | 9602-10459 | FOF61_08045 | ribose ABC transporter permease |
| 1525 | VNGH01000035.1 | TVV13855.1 JB | 456 [NA] | 151 [AA] | 2274-2729 | FOF61_08065 | hypothetical protein |
| 1526 | VNGH01000035.1 | TVV13856.1 JB | 1188 [NA] | 395 [AA] | 2755-3942 | FOF61_08070 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC |
| 1527 | VNGH01000035.1 | TVV13857.1 JB | 1245 [NA] | 414 [AA] | 3930-5174 | FOF61_08075 | serine/threonine protein phosphatase |
| 1528 | VNGH01000035.1 | TVV13858.1 JB | 1128 [NA] | 375 [AA] | 5194-6321 | FOF61_08080 | class I SAM-dependent RNA methyltransferase |
| 1529 | VNGH01000035.1 | TVV13859.1 JB | 411 [NA] | 136 [AA] | 6793-7203 | FOF61_08090 | cell division regulator GpsB |
| 1530 | VNGH01000035.1 | TVV13860.1 JB | 567 [NA] | 188 [AA] | 7303-7869 | FOF61_08095 | DUF1273 domain-containing protein |
| 1531 | VNGH01000035.1 | TVV13861.1 JB | 621 [NA] | 206 [AA] | 8023-8643 | FOF61_08100 | Holliday junction resolvase RecU |
| 1532 | VNGH01000035.1 | TVV13862.1 JB | 2328 [NA] | 775 [AA] | 8644-10971 | FOF61_08105 | penicillin-binding protein |
| 1533 | VNGH01000035.1 | TVV13863.1 JB | 114 [NA] | 37 [AA] | 11170->11283 | FOF61_08115 | IS982 family transposase |
| 1534 | VNGH01000035.1 | TVV13864.1 JB | 81 [NA] | 26 [AA] | 11010-11090 | FOF61_08110 | IS3 family transposase |
| 1535 | VNGH01000036.1 | TVV13769.1 JB | 114 [NA] | 37 [AA] | <1-115 | FOF61_08120 | IS982 family transposase |
| 1536 | VNGH01000036.1 | TVV13770.1 JB | 1386 [NA] | 461 [AA] | 152-1537 | FOF61_08125 | PH domain-containing protein |
| 1537 | VNGH01000036.1 | TVV13771.1 JB | 486 [NA] | 161 [AA] | 1521-2006 | FOF61_08130 | PH domain-containing protein |
| 1538 | VNGH01000036.1 | TVV13772.1 JB | 2520 [NA] | 839 [AA] | 2085-4604 | FOF61_08135 | excinuclease ABC subunit UvrA |
| 1539 | VNGH01000036.1 | TVV13773.1 JB | 1392 [NA] | 463 [AA] | 4724-6115 | FOF61_08140 | FAD-binding protein |
| 1540 | VNGH01000036.1 | TVV13774.1 JB | 417 [NA] | 138 [AA] | 6920-7336 | FOF61_08150 | helix-turn-helix transcriptional regulator |
| 1541 | VNGH01000036.1 | TVV13775.1 JB | 411 [NA] | 136 [AA] | 7465-7875 | FOF61_08155 | helix-turn-helix transcriptional regulator |
| 1542 | VNGH01000036.1 | TVV13776.1 JB | 366 [NA] | 121 [AA] | 8019-8384 | FOF61_08160 | TetR/AcrR family transcriptional regulator |
| 1543 | VNGH01000036.1 | TVV13777.1 JB | 345 [NA] | 114 [AA] | 8395-8739 | FOF61_08165 | hypothetical protein |
| 1544 | VNGH01000037.1 | TVV13747.1 JB | 114 [NA] | 37 [AA] | <1-115 | FOF61_08175 | IS982 family transposase |
| 1545 | VNGH01000037.1 | TVV13748.1 JB | 846 [NA] | 281 [AA] | 256-1101 | FOF61_08180 | helix-turn-helix domain-containing protein |
| 1546 | VNGH01000037.1 | TVV13749.1 JB | 747 [NA] | 248 [AA] | 1153-1899 | FOF61_08185 | amino acid ABC transporter ATP-binding protein |
| 1547 | VNGH01000037.1 | TVV13750.1 JB | 1605 [NA] | 534 [AA] | 1899-3503 | FOF61_08190 | ABC transporter substrate-binding protein/permease |
| 1548 | VNGH01000037.1 | TVV13751.1 JB | 633 [NA] | 210 [AA] | 3827-4459 | FOF61_08195 | DNA-3-methyladenine glycosylase |
| 1549 | VNGH01000037.1 | TVV13752.1 JB | 363 [NA] | 120 [AA] | 4512-4874 | FOF61_08200 | DUF488 family protein |
| 1550 | VNGH01000037.1 | TVV13753.1 JB | 696 [NA] | 231 [AA] | 4855-5550 | FOF61_08205 | NAD-dependent protein deacylase |
| 1551 | VNGH01000037.1 | TVV13754.1 JB | 477 [NA] | 158 [AA] | 5637-6113 | FOF61_08210 | hypothetical protein |
| 1552 | VNGH01000037.1 | TVV13755.1 JB | 213 [NA] | 70 [AA] | 6396-6608 | FOF61_08215 | hypothetical protein |
| 1553 | VNGH01000037.1 | TVV13756.1 JB | 1458 [NA] | 485 [AA] | 6975-8432 | FOF61_08220 | DUF1906 domain-containing protein |
| 1554 | VNGH01000037.1 | TVV13757.1 JB | 114 [NA] | 37 [AA] | 8597->8712 | FOF61_08225 | IS982 family transposase |
| 1555 | VNGH01000038.1 | TVV13724.1 JB | 1041 [NA] | 346 [AA] | 244-1284 | FOF61_08230 | hypothetical protein |
| 1556 | VNGH01000038.1 | TVV13725.1 JB | 1017 [NA] | 338 [AA] | 1543-2559 | FOF61_08235 | acyltransferase |
| 1557 | VNGH01000038.1 | TVV13726.1 JB | 1440 [NA] | 479 [AA] | 2634-4073 | FOF61_08240 | flippase |
| 1558 | VNGH01000038.1 | TVV13727.1 JB | 987 [NA] | 328 [AA] | 4103-5089 | FOF61_08245 | glycosyltransferase |
| 1559 | VNGH01000038.1 | TVV13728.1 JB | 1140 [NA] | 379 [AA] | 5132-6271 | FOF61_08250 | glycosyltransferase family 4 protein |
| 1560 | VNGH01000038.1 | TVV13729.1 JB | 1110 [NA] | 369 [AA] | 6277-7386 | FOF61_08255 | UDP-galactopyranose mutase |
| 1561 | VNGH01000039.1 | TVV13639.1 JB | 114 [NA] | 37 [AA] | <1-114 | FOF61_08265 | IS982 family transposase |
| 1562 | VNGH01000039.1 | TVV13640.1 JB | 1845 [NA] | 614 [AA] | 334-2178 | FOF61_08270 | translational GTPase TypA |
| 1563 | VNGH01000039.1 | TVV13641.1 JB | 1194 [NA] | 397 [AA] | 2279-3472 | FOF61_08275 | cell division protein FtsW |
| 1564 | VNGH01000039.1 | TVV13642.1 JB | 333 [NA] | 110 [AA] | 3469-3801 | FOF61_08280 | DUF2129 domain-containing protein |
| 1565 | VNGH01000039.1 | TVV13643.1 JB | 552 [NA] | 183 [AA] | 3798-4349 | FOF61_08285 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD |
| 1566 | VNGH01000039.1 | TVV13644.1 JB | 498 [NA] | 165 [AA] | 4351-4848 | FOF61_08290 | pantetheine-phosphate adenylyltransferase |
| 1567 | VNGH01000039.1 | TVV13645.1 JB | 1032 [NA] | 343 [AA] | 4838-5869 | FOF61_08295 | PDZ domain-containing protein |
| 1568 | VNGH01000039.1 | TVV13646.1 JB | 651 [NA] | 216 [AA] | 5947-6597 | FOF61_08300 | ComEA family DNA-binding protein |
| 1569 | VNGH01000039.1 | TVV13647.1 JB | 111 [NA] | 36 [AA] | 6795->6907 | FOF61_08310 | IS982 family transposase |
| 1570 | VNGH01000040.1 | TVV13616.1 JB | 231 [NA] | 76 [AA] | 303-533 | FOF61_08315 | hypothetical protein |
| 1571 | VNGH01000040.1 | TVV13617.1 JB | 393 [NA] | 130 [AA] | 526-918 | FOF61_08320 | hypothetical protein |
| 1572 | VNGH01000040.1 | TVV13618.1 JB | 258 [NA] | 85 [AA] | 1236-1493 | FOF61_08325 | hypothetical protein |
| 1573 | VNGH01000040.1 | TVV13619.1 JB | 237 [NA] | 78 [AA] | 1784-2020 | FOF61_08330 | hypothetical protein |
| 1574 | VNGH01000040.1 | TVV13620.1 JB | 822 [NA] | 273 [AA] | 2355-3176 | FOF61_08335 | hypothetical protein |
| 1575 | VNGH01000040.1 | TVV13621.1 JB | 372 [NA] | 123 [AA] | 3207-3578 | FOF61_08340 | hypothetical protein |
| 1576 | VNGH01000040.1 | TVV13622.1 JB | 231 [NA] | 76 [AA] | 3571-3801 | FOF61_08345 | hypothetical protein |
| 1577 | VNGH01000040.1 | TVV13623.1 JB | 333 [NA] | 110 [AA] | 3774-4106 | FOF61_08350 | helix-turn-helix domain-containing protein |
| 1578 | VNGH01000040.1 | TVV13624.1 JB | 243 [NA] | 80 [AA] | 4118-4360 | FOF61_08355 | helix-turn-helix transcriptional regulator |
| 1579 | VNGH01000040.1 | TVV13625.1 JB | 600 [NA] | 199 [AA] | 4534-5133 | FOF61_08360 | helix-turn-helix domain-containing protein |
| 1580 | VNGH01000040.1 | TVV13626.1 JB | 1119 [NA] | 372 [AA] | 5163-6281 | FOF61_08365 | site-specific integrase |
| 1581 | VNGH01000041.1 | TVV13594.1 JB | 510 [NA] | 169 [AA] | 357-866 | FOF61_08380 | hypothetical protein |
| 1582 | VNGH01000041.1 | TVV13595.1 JB | 858 [NA] | 285 [AA] | 1068-1925 | FOF61_08385 | HNH endonuclease |
| 1583 | VNGH01000041.1 | TVV13596.1 JB | 252 [NA] | 83 [AA] | 2504-2755 | FOF61_08390 | hypothetical protein |
| 1584 | VNGH01000041.1 | TVV13597.1 JB | 789 [NA] | 262 [AA] | 2771-3559 | FOF61_08395 | DUF1828 domain-containing protein |
| 1585 | VNGH01000041.1 | TVV13598.1 JB | 1164 [NA] | 387 [AA] | 3600-4763 | FOF61_08400 | hypothetical protein |
| 1586 | VNGH01000041.1 | TVV13599.1 JB | 840 [NA] | 279 [AA] | 5038-5877 | FOF61_08405 | Rpn family recombination-promoting nuclease/putative transposase |
| 1587 | VNGH01000041.1 | TVV13600.1 JB | 228 [NA] | 75 [AA] | 5902-6129 | FOF61_08410 | hypothetical protein |
| 1588 | VNGH01000041.1 | TVV13601.1 JB | 114 [NA] | 37 [AA] | 6179->6293 | FOF61_08415 | IS982 family transposase |
| 1589 | VNGH01000043.1 | TVV13499.1 JB | 114 [NA] | 37 [AA] | <1-114 | FOF61_08435 | IS982 family transposase |
| 1590 | VNGH01000043.1 | TVV13500.1 JB | 837 [NA] | 278 [AA] | 174-1010 | FOF61_08440 | helix-turn-helix transcriptional regulator |
| 1591 | VNGH01000043.1 | TVV13501.1 JB | 825 [NA] | 274 [AA] | 1192-2016 | FOF61_08445 | Rpn family recombination-promoting nuclease/putative transposase |
| 1592 | VNGH01000043.1 | TVV13502.1 JB | 1626 [NA] | 541 [AA] | 2139-3764 | FOF61_08450 | chaperonin GroEL |
| 1593 | VNGH01000043.1 | TVV13503.1 JB | 285 [NA] | 94 [AA] | 3808-4092 | FOF61_08455 | co-chaperone GroES |
| 1594 | VNGH01000043.1 | TVV13504.1 JB | 160 [NA] | 53 [AA] | 4389->4548 | FOF61_08460 | ISL3 family transposase |
| 1595 | VNGH01000044.1 | TVV13496.1 JB | 924 [NA] | 307 [AA] | 217-1140 | FOF61_08465 | DUF4065 domain-containing protein |
| 1596 | VNGH01000044.1 | TVV13497.1 JB | 1056 [NA] | 351 [AA] | 2443-3498 | FOF61_08475 | tyrosine recombinase XerS |
| 1597 | VNGH01000044.1 | TVV13498.1 JB | 111 [NA] | 36 [AA] | 3949->4061 | FOF61_08485 | IS982 family transposase |
| 1598 | VNGH01000045.1 | TVV13474.1 JB | 960 [NA] | 319 [AA] | 362-1321 | FOF61_08490 | NAD(P)/FAD-dependent oxidoreductase |
| 1599 | VNGH01000045.1 | TVV13475.1 JB | 513 [NA] | 170 [AA] | 1332-1844 | FOF61_08495 | phosphatidylglycerophosphatase A |
| 1600 | VNGH01000045.1 | TVV13476.1 JB | 651 [NA] | 216 [AA] | 1847-2497 | FOF61_08500 | hypothetical protein |
| 1601 | VNGH01000045.1 | TVV13477.1 JB | 1236 [NA] | 411 [AA] | 2512-3747 | FOF61_08505 | serine hydroxymethyltransferase |
| 1602 | VNGH01000046.1 | TVV13441.1 JB | 111 [NA] | 36 [AA] | <1-112 | FOF61_08510 | IS982 family transposase |
| 1603 | VNGH01000046.1 | TVV13442.1 JB | 1173 [NA] | 390 [AA] | 1241-2413 | FOF61_08520 | restriction endonuclease subunit S |
| 1604 | VNGH01000047.1 | TVV13440.1 JB | 2034 [NA] | 678 [AA] | <1-2034 | FOF61_08525 | YSIRK-type signal peptide-containing protein |
| 1605 | VNGH01000049.1 | TVV13369.1 JB | 947 [NA] | 315 [AA] | <1-947 | FOF61_08615 | hypothetical protein |
| 1606 | VNGH01000049.1 | TVV13370.1 JB | 579 [NA] | 192 [AA] | 934->1512 | FOF61_08620 | phage portal protein |
| 1607 | VNGH01000050.1 | TVV13359.1 JB | 1179 [NA] | 392 [AA] | 131-1309 | FOF61_08625 | IS256 family transposase |
| 1608 | VNGH01000052.1 | TVV13352.1 JB | 846 [NA] | 282 [AA] | <1-846 | FOF61_08635 | IS982 family transposase |