Genome Explorer: Helicobacter pylori Gambia94/24 (SEQF10149.1)
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NCBI Annotation for SEQF10149.1
| Genome selected: Helicobacter pylori Gambia94/24 | |||
| Contigs: | 2 | Bases: | 1712468 bps |
| CDS: | 1605 | rRNA: | 6 |
| tmRNA: | 0 | tRNA: | 36 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | CP002332.1 | ADU82361.1 JB | 789 [NA] | 262 [AA] | 1599851-1600639 | HPGAM_07940 | putative glycerol-3-phosphate acyltransferase PlsY |
| 1502 | CP002332.1 | ADU82362.1 JB | 354 [NA] | 117 [AA] | 1600636-1600989 | HPGAM_07945 | dihydroneopterin aldolase |
| 1503 | CP002332.1 | ADU82363.1 JB | 303 [NA] | 100 [AA] | 1600973-1601275 | HPGAM_07950 | hypothetical protein |
| 1504 | CP002332.1 | ADU82364.1 JB | 2640 [NA] | 879 [AA] | 1601452-1604091 | HPGAM_07955 | iron-regulated outer membrane protein |
| 1505 | CP002332.1 | ADU82365.1 JB | 1161 [NA] | 386 [AA] | 1604318-1605478 | HPGAM_07960 | selenocysteine synthase |
| 1506 | CP002332.1 | ADU82366.1 JB | 1188 [NA] | 395 [AA] | 1605574-1606761 | HPGAM_07965 | transcription elongation factor NusA |
| 1507 | CP002332.1 | ADU82367.1 JB | 135 [NA] | 44 [AA] | 1608069-1608203 | HPGAM_07980 | hypothetical protein |
| 1508 | CP002332.1 | ADU82368.1 JB | 99 [NA] | 32 [AA] | 1608231-1608329 | HPGAM_07985 | hypothetical protein |
| 1509 | CP002332.1 | ADU82369.1 JB | 93 [NA] | 30 [AA] | 1608532-1608624 | HPGAM_07990 | hypothetical protein |
| 1510 | CP002332.1 | ADU82370.1 JB | 2910 [NA] | 969 [AA] | 1614780-1617689 | HPGAM_08015 | type III restriction enzyme |
| 1511 | CP002332.1 | ADU82371.1 JB | 588 [NA] | 195 [AA] | 1617692-1618279 | HPGAM_08020 | type III R-M system modification enzyme |
| 1512 | CP002332.1 | ADU82372.1 JB | 1383 [NA] | 460 [AA] | 1618276-1619658 | HPGAM_08025 | putative type III restriction enzyme M protein (type III adenine specific DNA methyltransferase (Mod)) |
| 1513 | CP002332.1 | ADU82373.1 JB | 1872 [NA] | 623 [AA] | 1619710-1621581 | HPGAM_08030 | ATP-dependent DNA helicase RecG |
| 1514 | CP002332.1 | ADU82374.1 JB | 339 [NA] | 112 [AA] | 1621658-1621996 | HPGAM_08035 | hypothetical protein |
| 1515 | CP002332.1 | ADU82375.1 JB | 636 [NA] | 211 [AA] | 1622000-1622635 | HPGAM_08040 | hypothetical protein |
| 1516 | CP002332.1 | ADU82376.1 JB | 753 [NA] | 250 [AA] | 1622632-1623384 | HPGAM_08045 | exodeoxyribonuclease III |
| 1517 | CP002332.1 | ADU82377.1 JB | 1440 [NA] | 479 [AA] | 1623564-1625003 | HPGAM_08055 | hypothetical protein |
| 1518 | CP002332.1 | ADU82378.1 JB | 1374 [NA] | 457 [AA] | 1625232-1626605 | HPGAM_08060 | chromosomal replication initiation protein |
| 1519 | CP002332.1 | ADU82379.1 JB | 543 [NA] | 180 [AA] | 1626757-1627299 | HPGAM_08065 | hypothetical protein |
| 1520 | CP002332.1 | ADU82380.1 JB | 240 [NA] | 79 [AA] | 1627334-1627573 | HPGAM_08070 | hypothetical protein |
| 1521 | CP002332.1 | ADU82381.1 JB | 1794 [NA] | 597 [AA] | 1627574-1629367 | HPGAM_08075 | glucosamine--fructose-6-phosphate aminotransferase |
| 1522 | CP002332.1 | ADU82382.1 JB | 627 [NA] | 208 [AA] | 1629390-1630016 | HPGAM_08080 | FAD-dependent thymidylate synthase |
| 1523 | CP002332.1 | ADU82383.1 JB | 93 [NA] | 30 [AA] | 1630165-1630257 | HPGAM_08085 | hypothetical protein |
| 1524 | CP002332.1 | ADU82384.1 JB | 102 [NA] | 33 [AA] | 1630263-1630364 | HPGAM_08090 | hypothetical protein |
| 1525 | CP002332.1 | ADU82385.1 JB | 129 [NA] | 42 [AA] | 1630686-1630814 | HPGAM_08095 | hypothetical protein |
| 1526 | CP002332.1 | ADU82386.1 JB | 624 [NA] | 207 [AA] | 1630975-1631598 | HPGAM_08100 | typeI R-M system specificity subunit |
| 1527 | CP002332.1 | ADU82387.1 JB | 2454 [NA] | 817 [AA] | 1631592-1634045 | HPGAM_08105 | Type I restriction-modification enzyme subunit M |
| 1528 | CP002332.1 | ADU82388.1 JB | 2976 [NA] | 991 [AA] | 1634114-1637089 | HPGAM_08110 | typeI restriction enzyme R protein |
| 1529 | CP002332.1 | ADU82389.1 JB | 708 [NA] | 235 [AA] | 1637089-1637796 | HPGAM_08115 | hypothetical protein |
| 1530 | CP002332.1 | ADU82390.1 JB | 2526 [NA] | 841 [AA] | 1637880-1640405 | HPGAM_08120 | putative IRON(III) dicitrate transport protein |
| 1531 | CP002332.1 | ADU82391.1 JB | 969 [NA] | 322 [AA] | 1640980-1641948 | HPGAM_08125 | arginase |
| 1532 | CP002332.1 | ADU82392.1 JB | 1143 [NA] | 380 [AA] | 1642153-1643295 | HPGAM_08130 | alanine dehydrogenase |
| 1533 | CP002332.1 | ADU82393.1 JB | 1098 [NA] | 365 [AA] | 1643563-1644660 | HPGAM_08135 | zinc-dependent alcohol dehydrogenase |
| 1534 | CP002332.1 | ADU82394.1 JB | 1722 [NA] | 573 [AA] | 1644793-1646514 | HPGAM_08140 | hypothetical protein |
| 1535 | CP002332.1 | ADU82395.1 JB | 729 [NA] | 242 [AA] | 1646525-1647253 | HPGAM_08145 | hypothetical protein |
| 1536 | CP002332.1 | ADU82396.1 JB | 855 [NA] | 284 [AA] | 1647439-1648293 | HPGAM_08150 | probable inorganic polyphosphate/ATP-NAD kinase |
| 1537 | CP002332.1 | ADU82397.1 JB | 1569 [NA] | 522 [AA] | 1648314-1649882 | HPGAM_08155 | DNA repair protein RecN |
| 1538 | CP002332.1 | ADU82398.1 JB | 1311 [NA] | 436 [AA] | 1649882-1651192 | HPGAM_08160 | hypothetical protein |
| 1539 | CP002332.1 | ADU82399.1 JB | 297 [NA] | 98 [AA] | 1651212-1651508 | HPGAM_08165 | hypothetical protein |
| 1540 | CP002332.1 | ADU82400.1 JB | 978 [NA] | 325 [AA] | 1651662-1652639 | HPGAM_08170 | Cysteine-rich protein G |
| 1541 | CP002332.1 | ADU82401.1 JB | 864 [NA] | 287 [AA] | 1652686-1653549 | HPGAM_08175 | DNA polymerase III subunit epsilon |
| 1542 | CP002332.1 | ADU82402.1 JB | 654 [NA] | 217 [AA] | 1653527-1654180 | HPGAM_08180 | ribulose-phosphate 3-epimerase |
| 1543 | CP002332.1 | ADU82403.1 JB | 873 [NA] | 290 [AA] | 1654251-1655123 | HPGAM_08185 | fructose-1,6-bisphosphatase |
| 1544 | CP002332.1 | ADU82404.1 JB | 204 [NA] | 67 [AA] | 1655123-1655326 | HPGAM_08190 | hypothetical protein |
| 1545 | CP002332.1 | ADU82405.1 JB | 834 [NA] | 277 [AA] | 1655664-1656497 | HPGAM_08195 | type II restriction enzyme |
| 1546 | CP002332.1 | ADU82406.1 JB | 642 [NA] | 213 [AA] | 1656585-1657226 | HPGAM_08200 | putative transcriptional regulator |
| 1547 | CP002332.1 | ADU82407.1 JB | 1068 [NA] | 355 [AA] | 1657405-1658472 | HPGAM_08205 | elongation factor Ts |
| 1548 | CP002332.1 | ADU82408.1 JB | 795 [NA] | 264 [AA] | 1658472-1659266 | HPGAM_08210 | 30S ribosomal protein S2 |
| 1549 | CP002332.1 | ADU82409.1 JB | 2841 [NA] | 946 [AA] | 1659516-1662356 | HPGAM_08215 | putative recombination protein RecB |
| 1550 | CP002332.1 | ADU82410.1 JB | 1317 [NA] | 438 [AA] | 1662380-1663696 | HPGAM_08220 | pH-dependent sodium/proton antiporter |
| 1551 | CP002332.1 | ADU82411.1 JB | 384 [NA] | 127 [AA] | 1663744-1664127 | HPGAM_08225 | preprotein translocase subunit YajC |
| 1552 | CP002332.1 | ADU82412.1 JB | 1578 [NA] | 525 [AA] | 1664124-1665701 | HPGAM_08230 | preprotein translocase subunit SecD |
| 1553 | CP002332.1 | ADU82413.1 JB | 972 [NA] | 323 [AA] | 1665710-1666681 | HPGAM_08235 | preprotein translocase subunit SecF |
| 1554 | CP002332.1 | ADU82414.1 JB | 339 [NA] | 112 [AA] | 1666691-1667029 | HPGAM_08240 | hypothetical protein |
| 1555 | CP002332.1 | ADU82415.1 JB | 2421 [NA] | 806 [AA] | 1667039-1669459 | HPGAM_08245 | leucyl-tRNA synthetase |
| 1556 | CP002332.1 | ADU82416.1 JB | 513 [NA] | 170 [AA] | 1669456-1669968 | HPGAM_08250 | hypothetical protein |
| 1557 | CP002332.1 | ADU82417.1 JB | 1170 [NA] | 389 [AA] | 1669958-1671127 | HPGAM_08255 | folylpolyglutamate synthase |
| 1558 | CP002332.1 | ADU82418.1 JB | 927 [NA] | 308 [AA] | 1671127-1672053 | HPGAM_08260 | hypothetical protein |
| 1559 | CP002332.1 | ADU82419.1 JB | 939 [NA] | 312 [AA] | 1672063-1673001 | HPGAM_08265 | hypothetical protein |
| 1560 | CP002332.1 | ADU82420.1 JB | 411 [NA] | 136 [AA] | 1672920-1673330 | HPGAM_08270 | hypothetical protein |
| 1561 | CP002332.1 | ADU82421.1 JB | 3006 [NA] | 1001 [AA] | 1673334-1676339 | HPGAM_08275 | transcription-repair coupling factor |
| 1562 | CP002332.1 | ADU82422.1 JB | 504 [NA] | 167 [AA] | 1676464-1676967 | HPGAM_08280 | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
| 1563 | CP002332.1 | ADU82423.1 JB | 1239 [NA] | 412 [AA] | 1676978-1678216 | HPGAM_08285 | ubiquinol-cytochrome c reductase cytochrome b subunit |
| 1564 | CP002332.1 | ADU82424.1 JB | 858 [NA] | 285 [AA] | 1678213-1679070 | HPGAM_08290 | ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit |
| 1565 | CP002332.1 | ADU82425.1 JB | 114 [NA] | 37 [AA] | 1679164-1679277 | HPGAM_08295 | hypothetical protein |
| 1566 | CP002332.1 | ADU82426.1 JB | 537 [NA] | 178 [AA] | 1680386-1680922 | HPGAM_08310 | hypothetical protein |
| 1567 | CP002332.1 | ADU82427.1 JB | 1848 [NA] | 615 [AA] | 1681319-1683166 | HPGAM_08315 | penicillin-binding protein |
| 1568 | CP002332.1 | ADU82428.1 JB | 330 [NA] | 109 [AA] | 1683317-1683646 | HPGAM_08320 | flagellar hook-basal body protein FliE |
| 1569 | CP002332.1 | ADU82429.1 JB | 486 [NA] | 161 [AA] | 1683774-1684259 | HPGAM_08325 | flagellar basal body rod protein FlgC |
| 1570 | CP002332.1 | ADU82430.1 JB | 423 [NA] | 140 [AA] | 1684273-1684695 | HPGAM_08330 | flagellar basal body rod protein FlgB |
| 1571 | CP002332.1 | ADU82431.1 JB | 138 [NA] | 45 [AA] | 1684682-1684819 | HPGAM_08335 | hypothetical protein |
| 1572 | CP002332.1 | ADU82432.1 JB | 1167 [NA] | 388 [AA] | 1684901-1686067 | HPGAM_08340 | cell division protein FtsW |
| 1573 | CP002332.1 | ADU82433.1 JB | 1008 [NA] | 335 [AA] | 1686087-1687094 | HPGAM_08345 | ABC-type transport system, periplasmic component; putative signal peptide |
| 1574 | CP002332.1 | ADU82434.1 JB | 597 [NA] | 198 [AA] | 1687332-1687928 | HPGAM_08350 | Alkyl hydroperoxide reductase |
| 1575 | CP002332.1 | ADU82435.1 JB | 132 [NA] | 43 [AA] | 1687970-1688101 | HPGAM_08355 | hypothetical protein |
| 1576 | CP002332.1 | ADU82436.1 JB | 816 [NA] | 271 [AA] | 1688076-1688891 | HPGAM_08360 | outer membrane protein |
| 1577 | CP002332.1 | ADU82437.1 JB | 108 [NA] | 35 [AA] | 1689182-1689289 | HPGAM_08365 | hypothetical protein |
| 1578 | CP002332.1 | ADU82438.1 JB | 1767 [NA] | 588 [AA] | 1689383-1691149 | HPGAM_08370 | penicillin-binding protein 2 |
| 1579 | CP002332.1 | ADU82439.1 JB | 444 [NA] | 147 [AA] | 1691130-1691573 | HPGAM_08375 | hypothetical protein |
| 1580 | CP002332.1 | ADU82440.1 JB | 627 [NA] | 208 [AA] | 1691585-1692211 | HPGAM_08380 | GTP-binding protein YsxC |
| 1581 | CP002332.1 | ADU82441.1 JB | 558 [NA] | 185 [AA] | 1692208-1692765 | HPGAM_08385 | hypothetical protein |
| 1582 | CP002332.1 | ADU82442.1 JB | 594 [NA] | 197 [AA] | 1692765-1693358 | HPGAM_08390 | hypothetical protein |
| 1583 | CP002332.1 | ADU82443.1 JB | 495 [NA] | 164 [AA] | 1693333-1693827 | HPGAM_08395 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) |
| 1584 | CP002332.1 | ADU82444.1 JB | 945 [NA] | 314 [AA] | 1693824-1694768 | HPGAM_08400 | rare lipoprotein A |
| 1585 | CP002332.1 | ADU82445.1 JB | 1113 [NA] | 370 [AA] | 1694768-1695880 | HPGAM_08405 | regulatory protein DniR |
| 1586 | CP002332.1 | ADU82446.1 JB | 765 [NA] | 254 [AA] | 1695976-1696740 | HPGAM_08410 | hypothetical protein |
| 1587 | CP002332.1 | ADU82447.1 JB | 621 [NA] | 206 [AA] | 1696815-1697435 | HPGAM_08415 | riboflavin synthase subunit alpha |
| 1588 | CP002332.1 | ADU82448.1 JB | 273 [NA] | 90 [AA] | 1697436-1697708 | HPGAM_08420 | hypothetical protein |
| 1589 | CP002332.1 | ADU82449.1 JB | 984 [NA] | 327 [AA] | 1697727-1698710 | HPGAM_08425 | DL-methionine transporter ATP-binding subunit |
| 1590 | CP002332.1 | ADU82450.1 JB | 648 [NA] | 215 [AA] | 1698712-1699359 | HPGAM_08430 | D-methionine transport system permease protein |
| 1591 | CP002332.1 | ADU82451.1 JB | 132 [NA] | 43 [AA] | 1699442-1699573 | HPGAM_08435 | hypothetical protein |
| 1592 | CP002332.1 | ADU82452.1 JB | 432 [NA] | 143 [AA] | 1699549-1699980 | HPGAM_08440 | hypothetical protein |
| 1593 | CP002332.1 | ADU82453.1 JB | 597 [NA] | 198 [AA] | 1699990-1700586 | HPGAM_08445 | hypothetical protein |
| 1594 | CP002332.1 | ADU82454.1 JB | 1008 [NA] | 335 [AA] | 1700586-1701593 | HPGAM_08450 | putative undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase |
| 1595 | CP002332.1 | ADU82455.1 JB | 789 [NA] | 262 [AA] | 1701733-1702521 | HPGAM_08455 | pyridoxine 5'-phosphate synthase |
| 1596 | CP002332.1 | ADU82456.1 JB | 924 [NA] | 307 [AA] | 1702523-1703446 | HPGAM_08460 | 4-hydroxythreonine-4-phosphate dehydrogenase |
| 1597 | CP002332.1 | ADU82457.1 JB | 1023 [NA] | 340 [AA] | 1703648-1704670 | HPGAM_08465 | UGMP family protein |
| 1598 | CP002332.1 | ADU82458.1 JB | 789 [NA] | 262 [AA] | 1705549-1706337 | HPGAM_08470 | flagellar basal body rod protein FlgG |
| 1599 | CP002332.1 | ADU82459.1 JB | 99 [NA] | 32 [AA] | 1706334-1706432 | HPGAM_08475 | hypothetical protein |
| 1600 | CP002332.1 | ADU82460.1 JB | 393 [NA] | 130 [AA] | 1706436-1706828 | HPGAM_08480 | hypothetical protein |
| 1601 | CP002332.1 | ADU82461.1 JB | 585 [NA] | 194 [AA] | 1706903-1707487 | HPGAM_08485 | hypothetical protein |
| 1602 | CP002332.1 | ADU82462.1 JB | 141 [NA] | 46 [AA] | 1708050-1708190 | HPGAM_08490 | hypothetical protein |
| 1603 | CP002332.1 | ADU82463.1 JB | 762 [NA] | 253 [AA] | 1708277-1709038 | HPGAM_08495 | hypothetical protein |
| 1604 | CP002332.1 | ADU82464.1 JB | 159 [NA] | 52 [AA] | 1709404-1709562 | HPGAM_08500 | hypothetical protein |
| 1605 | CP002333.1 | ADU82465.1 JB | 1611 [NA] | 536 [AA] | 91-1701 | HPGAM_08589 | hypothetical protein |