HOMD ::species::Streptococcus infantis

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Streptococcus infantis

Download Options

Full Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus infantis
Lower rank member(s): [Subspecies:clade_431] [Subspecies:clade_638]

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

combined from subspecies

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	1.205	1.444	5.059	5.246	4.099	1.266	1.795	1.976	1.276	0.003
10^thp	0.252	0.459	2.777	2.924	1.711	0.277	0.274	0.319	0.287	0.000
90^thp	2.289	3.180	7.433	7.393	6.544	2.710	4.428	5.268	2.951	0.010
Stdev	1.059	0.982	1.838	1.743	1.914	0.946	1.626	1.885	0.983	0.005
Prev	100.000	100.000	100.000	100.000	100.000	97.403	100.000	100.000	100.000	54.545

From: Eren et al.(2014) (V3-V5)

Notes:

combined from subspecies

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.781	1.027	6.781	7.529	6.041	1.402	3.055	2.618	1.395	0.002
10^thp	0.130	0.246	2.165	3.072	1.613	0.423	0.422	0.340	0.424	0.000
90^thp	1.560	1.806	11.796	12.477	12.585	2.598	7.227	5.589	2.749	0.005
Stdev	0.903	1.228	4.018	3.665	4.156	0.912	3.066	2.784	1.002	0.005
Prev	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	18.881

From: Dewhirst 35x9 data (not published yet)

Notes:

combined from subspecies

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.894	1.132	5.656	6.409	5.663	6.867	4.085	4.188	3.698	0.060
10^thp	0.037	0.242	1.581	2.013	1.370	1.059	0.826	0.875	0.675	0.000
90^thp	2.342	2.220	11.350	11.380	10.024	11.681	7.191	8.339	6.769	0.141
Stdev	1.133	0.947	3.801	3.693	3.472	6.991	2.834	3.033	2.760	0.149
Prev	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	100.000	45.000