HOMD ::species::Prevotella sp._HMT_305

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Prevotella sp._HMT_305

Download Options

Full Lineage: Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; Prevotella sp._HMT_305

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)	No Notes

From: Eren et al.(2014) (V3-V5)

Notes:

Reads equally close to P. sp. HMT 305 and 396 were assigned half to each taxon.

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.001	0.001	0.000	0.010	0.028	0.132	0.083	0.063	0.048	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.000	0.028	0.095	0.358	0.271	0.169	0.146	0.000
Stdev	0.007	0.006	0.002	0.035	0.057	0.207	0.127	0.124	0.074	0.000
Prev	3.378	1.351	3.378	18.243	41.216	66.216	60.135	53.378	55.405	0.000

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.001	0.000	0.005	0.004	0.013	0.101	0.036	0.046	0.036	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.000	0.000	0.013	0.011	0.029	0.148	0.093	0.113	0.081	0.000
Stdev	0.003	0.001	0.015	0.009	0.026	0.261	0.039	0.080	0.062	0.000
Prev	14.286	2.941	22.222	50.000	71.429	86.111	84.848	77.419	76.471	0.000