HOMD ::species::Actinomyces viscosus

HOME
Taxonomy
Genomes
Proteomes
- View Genomic Tree based on Conserved Proteins
- All Protein Sequences Annotated from Genomes
16S rRNA Microbiome
Animal Microbiomes
- Mouse (MOMD)
Downloads
- Download Batch HOMD Data
- HOMD FTP Site
Resources
HOMD-v2
[Page-Help]

16S rRNA RefSeq: V15.23 Genomic RefSeq: V10.1

Species: Actinomyces viscosus

Download Options

Full Lineage: Bacteria; Actinobacteria; Actinomycetia; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces viscosus

^th

^th

^th

^th

From: Segata et al.(2012)	No Notes

From: Eren et al.(2014) (V1-V3)

Notes:

reads equally close to A. viscosus and A. sp. HMT 171 were assigned half to each taxon

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	ST
Avg	0.728	0.790	0.008	0.034	0.013	0.031	0.087	0.003	0.001	0.000
10^thp	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	2.373	1.827	0.016	0.095	0.041	0.052	0.020	0.011	0.000	0.000
Stdev	1.342	1.384	0.043	0.102	0.024	0.120	0.718	0.010	0.004	0.003
Prev	85.714	88.312	16.883	45.455	41.558	38.961	16.883	19.481	9.091	1.299

From: Eren et al.(2014) (V3-V5)	No Notes

From: Dewhirst 35x9 data (not published yet)

No Notes

percent abundance

	SubP	SupP	KG	BM	HP	SV	TH	PT	TD	NS
Avg	0.135	0.152	0.008	0.017	0.019	0.003	0.002	0.050	0.000	0.000
10^thp	0.002	0.007	0.000	0.000	0.000	0.000	0.000	0.000	0.000	0.000
90^thp	0.242	0.413	0.013	0.035	0.059	0.009	0.007	0.004	0.000	0.000
Stdev	0.414	0.249	0.018	0.030	0.028	0.006	0.006	0.271	0.001	0.000
Prev	100.000	97.059	69.444	82.353	71.429	50.000	24.242	32.258	2.941	0.000