Genome Explorer: Atopobium minutum DSM 20586 (SEQF9088.1)
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NCBI Annotation for SEQF9088.1
| Genome selected: Atopobium minutum DSM 20586 | |||
| Contigs: | 3 | Bases: | 1779562 bps |
| CDS: | 1588 | rRNA: | 6 |
| tmRNA: | 0 | tRNA: | 45 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 1501 | FNSH01000002.1 | SEC29256.1 JB | 759 [NA] | 252 [AA] | 117123-117881 | SAMN04489746_1607 | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase |
| 1502 | FNSH01000002.1 | SEC29329.1 JB | 318 [NA] | 105 [AA] | 118014-118331 | SAMN04489746_1608 | hypothetical protein |
| 1503 | FNSH01000002.1 | SEC29428.1 JB | 1656 [NA] | 551 [AA] | 118751-120406 | SAMN04489746_1610 | alpha-galactosidase |
| 1504 | FNSH01000002.1 | SEC29496.1 JB | 1392 [NA] | 463 [AA] | 120597-121988 | SAMN04489746_1611 | aspartyl aminopeptidase |
| 1505 | FNSH01000002.1 | SEC29561.1 JB | 990 [NA] | 329 [AA] | 122000-122989 | SAMN04489746_1612 | Glycosyltransferase involved in cell wall bisynthesis |
| 1506 | FNSH01000002.1 | SEC29636.1 JB | 1749 [NA] | 582 [AA] | 122997-124745 | SAMN04489746_1613 | hypothetical protein |
| 1507 | FNSH01000002.1 | SEC29710.1 JB | 369 [NA] | 122 [AA] | 124745-125113 | SAMN04489746_1614 | Uncharacterized membrane protein YccF, DUF307 family |
| 1508 | FNSH01000002.1 | SEC29780.1 JB | 1041 [NA] | 346 [AA] | 125212-126252 | SAMN04489746_1615 | Glycosyl transferase family 2 |
| 1509 | FNSH01000002.1 | SEC29844.1 JB | 906 [NA] | 301 [AA] | 126458-127363 | SAMN04489746_1616 | fructose-1-phosphate kinase |
| 1510 | FNSH01000002.1 | SEC29905.1 JB | 2850 [NA] | 949 [AA] | 127820-130669 | SAMN04489746_1617 | LPXTG-motif cell wall anchor domain-containing protein |
| 1511 | FNSH01000002.1 | SEC29969.1 JB | 1554 [NA] | 517 [AA] | 131008-132561 | SAMN04489746_1618 | Uncharacterized membrane protein YfcC, ion transporter superfamily |
| 1512 | FNSH01000002.1 | SEC30021.1 JB | 774 [NA] | 257 [AA] | 132687-133460 | SAMN04489746_1619 | anti-anti-sigma factor |
| 1513 | FNSH01000002.1 | SEC30093.1 JB | 2247 [NA] | 748 [AA] | 133501-135747 | SAMN04489746_1620 | GAF domain-containing protein |
| 1514 | FNSH01000002.1 | SEC30176.1 JB | 378 [NA] | 125 [AA] | 136094-136471 | SAMN04489746_1622 | hypothetical protein |
| 1515 | FNSH01000002.1 | SEC30255.1 JB | 507 [NA] | 168 [AA] | 136780-137286 | SAMN04489746_1623 | hypothetical protein |
| 1516 | FNSH01000002.1 | SEC30326.1 JB | 744 [NA] | 247 [AA] | 137302-138045 | SAMN04489746_1624 | hypothetical protein |
| 1517 | FNSH01000002.1 | SEC30396.1 JB | 666 [NA] | 221 [AA] | 138048-138713 | SAMN04489746_1625 | Methyltransferase domain-containing protein |
| 1518 | FNSH01000002.1 | SEC30470.1 JB | 495 [NA] | 164 [AA] | 138727-139221 | SAMN04489746_1626 | hypothetical protein |
| 1519 | FNSH01000002.1 | SEC30536.1 JB | 882 [NA] | 293 [AA] | 139218-140099 | SAMN04489746_1627 | Glyoxylase, beta-lactamase superfamily II |
| 1520 | FNSH01000002.1 | SEC30616.1 JB | 249 [NA] | 82 [AA] | 140142-140390 | SAMN04489746_1628 | DNA-binding transcriptional regulator, XRE family |
| 1521 | FNSH01000002.1 | SEC30691.1 JB | 1722 [NA] | 573 [AA] | 140425-142146 | SAMN04489746_1629 | Uncharacterized protein YydD, contains DUF2326 domain |
| 1522 | FNSH01000002.1 | SEC30757.1 JB | 228 [NA] | 75 [AA] | 142136-142363 | SAMN04489746_1630 | hypothetical protein |
| 1523 | FNSH01000002.1 | SEC30829.1 JB | 1146 [NA] | 381 [AA] | 142347-143492 | SAMN04489746_1631 | hypothetical protein |
| 1524 | FNSH01000002.1 | SEC30911.1 JB | 141 [NA] | 46 [AA] | 143718-143858 | SAMN04489746_1632 | hypothetical protein |
| 1525 | FNSH01000002.1 | SEC30985.1 JB | 537 [NA] | 178 [AA] | 144169-144705 | SAMN04489746_1633 | regulatory protein, luxR family |
| 1526 | FNSH01000002.1 | SEC31045.1 JB | 180 [NA] | 59 [AA] | 144793-144972 | SAMN04489746_1634 | hypothetical protein |
| 1527 | FNSH01000002.1 | SEC31119.1 JB | 315 [NA] | 104 [AA] | 144920-145234 | SAMN04489746_1635 | hypothetical protein |
| 1528 | FNSH01000002.1 | SEC31186.1 JB | 1128 [NA] | 375 [AA] | 145224-146351 | SAMN04489746_1636 | Protein of unknown function |
| 1529 | FNSH01000002.1 | SEC31271.1 JB | 150 [NA] | 49 [AA] | 146925-147074 | SAMN04489746_1638 | hypothetical protein |
| 1530 | FNSH01000002.1 | SEC31342.1 JB | 1974 [NA] | 657 [AA] | 147133-149106 | SAMN04489746_1639 | DNA polymerase |
| 1531 | FNSH01000002.1 | SEC31414.1 JB | 672 [NA] | 223 [AA] | 149376-150047 | SAMN04489746_1640 | phage regulatory protein, rha family |
| 1532 | FNSH01000002.1 | SEC31480.1 JB | 402 [NA] | 133 [AA] | 150047-150448 | SAMN04489746_1641 | hypothetical protein |
| 1533 | FNSH01000003.1 | SEC34313.1 JB | 138 [NA] | 46 [AA] | <1-138 | SAMN04489746_1643 | hypothetical protein |
| 1534 | FNSH01000003.1 | SEC34402.1 JB | 1527 [NA] | 508 [AA] | 364-1890 | SAMN04489746_1644 | Site-specific DNA recombinase |
| 1535 | FNSH01000003.1 | SEC34449.1 JB | 183 [NA] | 60 [AA] | 1919-2101 | SAMN04489746_1645 | hypothetical protein |
| 1536 | FNSH01000003.1 | SEC34496.1 JB | 921 [NA] | 306 [AA] | 2698-3618 | SAMN04489746_1646 | Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family |
| 1537 | FNSH01000003.1 | SEC34575.1 JB | 414 [NA] | 137 [AA] | 3621-4034 | SAMN04489746_1647 | toxin secretion/phage lysis holin |
| 1538 | FNSH01000003.1 | SEC34646.1 JB | 777 [NA] | 258 [AA] | 4119-4895 | SAMN04489746_1648 | hypothetical protein |
| 1539 | FNSH01000003.1 | SEC34709.1 JB | 240 [NA] | 79 [AA] | 4867-5106 | SAMN04489746_1649 | hypothetical protein |
| 1540 | FNSH01000003.1 | SEC34773.1 JB | 234 [NA] | 77 [AA] | 5103-5336 | SAMN04489746_1650 | hypothetical protein |
| 1541 | FNSH01000003.1 | SEC34828.1 JB | 1998 [NA] | 665 [AA] | 5354-7351 | SAMN04489746_1651 | phage minor structural protein, N-terminal region |
| 1542 | FNSH01000003.1 | SEC34886.1 JB | 741 [NA] | 246 [AA] | 7351-8091 | SAMN04489746_1652 | hypothetical protein |
| 1543 | FNSH01000003.1 | SEC34959.1 JB | 2919 [NA] | 972 [AA] | 8088-11006 | SAMN04489746_1653 | phage tail tape measure protein, TP901 family, core region |
| 1544 | FNSH01000003.1 | SEC35027.1 JB | 165 [NA] | 54 [AA] | 11050-11214 | SAMN04489746_1654 | hypothetical protein |
| 1545 | FNSH01000003.1 | SEC35102.1 JB | 357 [NA] | 118 [AA] | 11229-11585 | SAMN04489746_1655 | hypothetical protein |
| 1546 | FNSH01000003.1 | SEC35167.1 JB | 600 [NA] | 199 [AA] | 11588-12187 | SAMN04489746_1656 | phage major tail protein, phi13 family |
| 1547 | FNSH01000003.1 | SEC35245.1 JB | 318 [NA] | 105 [AA] | 12194-12511 | SAMN04489746_1657 | hypothetical protein |
| 1548 | FNSH01000003.1 | SEC35298.1 JB | 384 [NA] | 127 [AA] | 12504-12887 | SAMN04489746_1658 | Bacteriophage HK97-gp10, putative tail-component |
| 1549 | FNSH01000003.1 | SEC35343.1 JB | 333 [NA] | 110 [AA] | 12887-13219 | SAMN04489746_1659 | phage head-tail adaptor, putative, SPP1 family |
| 1550 | FNSH01000003.1 | SEC35402.1 JB | 264 [NA] | 87 [AA] | 13221-13484 | SAMN04489746_1660 | uncharacterized phage protein (possible DNA packaging) |
| 1551 | FNSH01000003.1 | SEC35475.1 JB | 1191 [NA] | 396 [AA] | 13560-14750 | SAMN04489746_1661 | phage major capsid protein, HK97 family |
| 1552 | FNSH01000003.1 | SEC35541.1 JB | 738 [NA] | 245 [AA] | 14765-15502 | SAMN04489746_1662 | ATP-dependent Clp protease, protease subunit |
| 1553 | FNSH01000003.1 | SEC35601.1 JB | 1311 [NA] | 436 [AA] | 15528-16838 | SAMN04489746_1663 | phage portal protein, HK97 family |
| 1554 | FNSH01000003.1 | SEC35668.1 JB | 1608 [NA] | 535 [AA] | 16853-18460 | SAMN04489746_1664 | Phage terminase-like protein, large subunit, contains N-terminal HTH domain |
| 1555 | FNSH01000003.1 | SEC35738.1 JB | 282 [NA] | 93 [AA] | 18589-18870 | SAMN04489746_1665 | hypothetical protein |
| 1556 | FNSH01000003.1 | SEC35790.1 JB | 366 [NA] | 121 [AA] | 18876-19241 | SAMN04489746_1666 | hypothetical protein |
| 1557 | FNSH01000003.1 | SEC35856.1 JB | 177 [NA] | 58 [AA] | 19374-19550 | SAMN04489746_1667 | protein of unknown function |
| 1558 | FNSH01000003.1 | SEC35925.1 JB | 237 [NA] | 78 [AA] | 19535-19771 | SAMN04489746_1668 | hypothetical protein |
| 1559 | FNSH01000003.1 | SEC35997.1 JB | 645 [NA] | 214 [AA] | 19768-20412 | SAMN04489746_1669 | hypothetical protein |
| 1560 | FNSH01000003.1 | SEC36064.1 JB | 1500 [NA] | 499 [AA] | 20483-21982 | SAMN04489746_1670 | DNA (cytosine-5)-methyltransferase 1 |
| 1561 | FNSH01000003.1 | SEC36139.1 JB | 1263 [NA] | 420 [AA] | 21975-23237 | SAMN04489746_1671 | DNA modification methylase |
| 1562 | FNSH01000003.1 | SEC36207.1 JB | 783 [NA] | 260 [AA] | 23238-24020 | SAMN04489746_1672 | methionine adenosyltransferase |
| 1563 | FNSH01000003.1 | SEC36273.1 JB | 576 [NA] | 191 [AA] | 24031-24606 | SAMN04489746_1673 | hypothetical protein |
| 1564 | FNSH01000003.1 | SEC36339.1 JB | 399 [NA] | 132 [AA] | 24750-25148 | SAMN04489746_1674 | 5-methylcytosine-specific restriction enzyme A |
| 1565 | FNSH01000003.1 | SEC36415.1 JB | 435 [NA] | 144 [AA] | 25265-25699 | SAMN04489746_1675 | Protein of unknown function |
| 1566 | FNSH01000003.1 | SEC36481.1 JB | 1371 [NA] | 456 [AA] | 25771-27141 | SAMN04489746_1676 | SNF2 family N-terminal domain-containing protein |
| 1567 | FNSH01000003.1 | SEC36551.1 JB | 288 [NA] | 95 [AA] | 27138-27425 | SAMN04489746_1677 | VRR-NUC domain-containing protein |
| 1568 | FNSH01000003.1 | SEC36613.1 JB | 2205 [NA] | 734 [AA] | 27688-29892 | SAMN04489746_1678 | phage/plasmid primase, P4 family, C-terminal domain-containing protein |
| 1569 | FNSH01000003.1 | SEC36673.1 JB | 402 [NA] | 133 [AA] | 29889-30290 | SAMN04489746_1679 | hypothetical protein |
| 1570 | FNSH01000003.1 | SEC36749.1 JB | 672 [NA] | 223 [AA] | 30290-30961 | SAMN04489746_1680 | phage regulatory protein, rha family |
| 1571 | FNSH01000003.1 | SEC36815.1 JB | 1974 [NA] | 657 [AA] | 31231-33204 | SAMN04489746_1681 | DNA polymerase |
| 1572 | FNSH01000003.1 | SEC36880.1 JB | 141 [NA] | 46 [AA] | 33273-33413 | SAMN04489746_1682 | hypothetical protein |
| 1573 | FNSH01000003.1 | SEC36947.1 JB | 564 [NA] | 187 [AA] | 33424-33987 | SAMN04489746_1683 | Protein of unknown function |
| 1574 | FNSH01000003.1 | SEC37020.1 JB | 1128 [NA] | 375 [AA] | 33988-35115 | SAMN04489746_1684 | Protein of unknown function |
| 1575 | FNSH01000003.1 | SEC37085.1 JB | 315 [NA] | 104 [AA] | 35105-35419 | SAMN04489746_1685 | hypothetical protein |
| 1576 | FNSH01000003.1 | SEC37157.1 JB | 180 [NA] | 59 [AA] | 35367-35546 | SAMN04489746_1686 | hypothetical protein |
| 1577 | FNSH01000003.1 | SEC37216.1 JB | 537 [NA] | 178 [AA] | 35634-36170 | SAMN04489746_1687 | regulatory protein, luxR family |
| 1578 | FNSH01000003.1 | SEC37286.1 JB | 141 [NA] | 46 [AA] | 36481-36621 | SAMN04489746_1688 | hypothetical protein |
| 1579 | FNSH01000003.1 | SEC37353.1 JB | 1146 [NA] | 381 [AA] | 36847-37992 | SAMN04489746_1689 | hypothetical protein |
| 1580 | FNSH01000003.1 | SEC37416.1 JB | 228 [NA] | 75 [AA] | 37976-38203 | SAMN04489746_1690 | hypothetical protein |
| 1581 | FNSH01000003.1 | SEC37478.1 JB | 1722 [NA] | 573 [AA] | 38193-39914 | SAMN04489746_1691 | Uncharacterized protein YydD, contains DUF2326 domain |
| 1582 | FNSH01000003.1 | SEC37542.1 JB | 249 [NA] | 82 [AA] | 39949-40197 | SAMN04489746_1692 | DNA-binding transcriptional regulator, XRE family |
| 1583 | FNSH01000003.1 | SEC37603.1 JB | 882 [NA] | 293 [AA] | 40240-41121 | SAMN04489746_1693 | Glyoxylase, beta-lactamase superfamily II |
| 1584 | FNSH01000003.1 | SEC37670.1 JB | 495 [NA] | 164 [AA] | 41118-41612 | SAMN04489746_1694 | hypothetical protein |
| 1585 | FNSH01000003.1 | SEC37736.1 JB | 666 [NA] | 221 [AA] | 41626-42291 | SAMN04489746_1695 | Methyltransferase domain-containing protein |
| 1586 | FNSH01000003.1 | SEC37798.1 JB | 657 [NA] | 218 [AA] | 42294-42950 | SAMN04489746_1696 | hypothetical protein |
| 1587 | FNSH01000003.1 | SEC37861.1 JB | 453 [NA] | 150 [AA] | 43052-43504 | SAMN04489746_1697 | hypothetical protein |
| 1588 | FNSH01000003.1 | SEC37923.1 JB | 204 [NA] | 68 [AA] | 43798->44001 | SAMN04489746_1698 | hypothetical protein |