Genome Explorer: Lactobacillus salivarius ACS-116-V-Col5a (SEQF2120.1)
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NCBI Annotation for SEQF2120.1
| Genome selected: Lactobacillus salivarius ACS-116-V-Col5a | |||
| Contigs: | 154 | Bases: | 2044602 bps |
| CDS: | 2121 | rRNA: | 3 |
| tmRNA: | 1 | tRNA: | 55 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 2001 | AEBA01000140.1 | EFK78831.1 JB | 162 [NA] | 53 [AA] | 3174-3335 | HMPREF9269_0148 | hypothetical protein |
| 2002 | AEBA01000141.1 | EFK78818.1 JB | 741 [NA] | 246 [AA] | 1528-2268 | HMPREF9269_1450 | ABC transporter, ATP-binding protein |
| 2003 | AEBA01000141.1 | EFK78819.1 JB | 330 [NA] | 109 [AA] | 1118-1447 | HMPREF9269_1449 | hypothetical protein |
| 2004 | AEBA01000141.1 | EFK78820.1 JB | 1830 [NA] | 609 [AA] | 4344-6173 | HMPREF9269_1453 | GTP-binding protein LepA |
| 2005 | AEBA01000141.1 | EFK78821.1 JB | 1458 [NA] | 485 [AA] | 2268-3725 | HMPREF9269_1451 | ABC transporter, permease protein |
| 2006 | AEBA01000141.1 | EFK78822.1 JB | 1002 [NA] | 333 [AA] | 24-1025 | HMPREF9269_1448 | beta-lactamase |
| 2007 | AEBA01000142.1 | EFK78816.1 JB | 576 [NA] | 191 [AA] | 45-620 | HMPREF9269_0026 | hypothetical protein |
| 2008 | AEBA01000142.1 | EFK78817.1 JB | 378 [NA] | 125 [AA] | 794-1171 | HMPREF9269_0027 | large conductance mechanosensitive channel protein |
| 2009 | AEBA01000143.1 | EFK78812.1 JB | 339 [NA] | 112 [AA] | 415-753 | HMPREF9269_1271 | hypothetical protein |
| 2010 | AEBA01000143.1 | EFK78813.1 JB | 360 [NA] | 119 [AA] | 765-1124 | HMPREF9269_1272 | hypothetical protein |
| 2011 | AEBA01000143.1 | EFK78814.1 JB | 194 [NA] | 64 [AA] | <1-194 | HMPREF9269_1269 | hypothetical protein |
| 2012 | AEBA01000143.1 | EFK78815.1 JB | 165 [NA] | 54 [AA] | 249-413 | HMPREF9269_1270 | putative XkdX family protein |
| 2013 | AEBA01000144.1 | EFK78810.1 JB | 327 [NA] | 108 [AA] | 54-380 | HMPREF9269_0341 | hypothetical protein |
| 2014 | AEBA01000144.1 | EFK78811.1 JB | 112 [NA] | 37 [AA] | 392->503 | HMPREF9269_0342 | hypothetical protein |
| 2015 | AEBA01000146.1 | EFK78809.1 JB | 630 [NA] | 209 [AA] | 77-706 | HMPREF9269_1364 | hypothetical protein |
| 2016 | AEBA01000147.1 | EFK78798.1 JB | 369 [NA] | 122 [AA] | 13813-14181 | HMPREF9269_2091 | 6-pyruvoyl tetrahydropterin synthase-related domain protein |
| 2017 | AEBA01000147.1 | EFK78799.1 JB | 918 [NA] | 305 [AA] | 2975-3892 | HMPREF9269_2083 | glycine--tRNA ligase, alpha subunit |
| 2018 | AEBA01000147.1 | EFK78800.1 JB | 1404 [NA] | 467 [AA] | 10503-11906 | HMPREF9269_2088 | putative membrane protein |
| 2019 | AEBA01000147.1 | EFK78801.1 JB | 888 [NA] | 295 [AA] | 1652-2539 | HMPREF9269_2082 | hypothetical protein |
| 2020 | AEBA01000147.1 | EFK78802.1 JB | 597 [NA] | 198 [AA] | 11899-12495 | HMPREF9269_2089 | exosortase family protein |
| 2021 | AEBA01000147.1 | EFK78803.1 JB | 798 [NA] | 265 [AA] | 9498-10295 | HMPREF9269_2087 | Gram-positive signal peptide protein, YSIRK family |
| 2022 | AEBA01000147.1 | EFK78804.1 JB | 2082 [NA] | 693 [AA] | 3892-5973 | HMPREF9269_2084 | glycine--tRNA ligase, beta subunit |
| 2023 | AEBA01000147.1 | EFK78805.1 JB | 1854 [NA] | 617 [AA] | 6154-8007 | HMPREF9269_2085 | DNA primase |
| 2024 | AEBA01000147.1 | EFK78806.1 JB | 1119 [NA] | 372 [AA] | 8020-9138 | HMPREF9269_2086 | RNA polymerase sigma factor RpoD |
| 2025 | AEBA01000147.1 | EFK78807.1 JB | 1332 [NA] | 443 [AA] | 320-1651 | HMPREF9269_2081 | PTS system, lactose/cellobiose family IIC component |
| 2026 | AEBA01000147.1 | EFK78808.1 JB | 1335 [NA] | 444 [AA] | 12495-13829 | HMPREF9269_2090 | putative glycosyltransferase TIGR03111 |
| 2027 | AEBA01000148.1 | EFK78786.1 JB | 900 [NA] | 299 [AA] | 7092-7991 | HMPREF9269_0551 | putative membrane protein |
| 2028 | AEBA01000148.1 | EFK78787.1 JB | 1680 [NA] | 560 [AA] | <1-1680 | HMPREF9269_0544 | fibronectin-binding protein A domain protein |
| 2029 | AEBA01000148.1 | EFK78788.1 JB | 1200 [NA] | 399 [AA] | 8030-9229 | HMPREF9269_0552 | hypothetical protein |
| 2030 | AEBA01000148.1 | EFK78789.1 JB | 588 [NA] | 195 [AA] | 3412-3999 | HMPREF9269_0547 | signal peptidase I |
| 2031 | AEBA01000148.1 | EFK78790.1 JB | 873 [NA] | 290 [AA] | 2398-3270 | HMPREF9269_0546 | EDD domain protein, DegV family |
| 2032 | AEBA01000148.1 | EFK78791.1 JB | 139 [NA] | 46 [AA] | 10987->11125 | HMPREF9269_0556 | hypothetical protein |
| 2033 | AEBA01000148.1 | EFK78792.1 JB | 606 [NA] | 201 [AA] | 10210-10815 | HMPREF9269_0554 | acetyltransferase, GNAT family |
| 2034 | AEBA01000148.1 | EFK78793.1 JB | 432 [NA] | 143 [AA] | 1868-2299 | HMPREF9269_0545 | hypothetical protein |
| 2035 | AEBA01000148.1 | EFK78794.1 JB | 1254 [NA] | 417 [AA] | 4732-5985 | HMPREF9269_0549 | glycine hydroxymethyltransferase |
| 2036 | AEBA01000148.1 | EFK78795.1 JB | 840 [NA] | 279 [AA] | 6108-6947 | HMPREF9269_0550 | putative phosphoesterase |
| 2037 | AEBA01000148.1 | EFK78796.1 JB | 897 [NA] | 298 [AA] | 9222-10118 | HMPREF9269_0553 | ABC transporter, ATP-binding protein |
| 2038 | AEBA01000148.1 | EFK78797.1 JB | 450 [NA] | 149 [AA] | 4224-4673 | HMPREF9269_0548 | ASCH domain protein |
| 2039 | AEBA01000149.1 | EFK78757.1 JB | 648 [NA] | 215 [AA] | 3416-4063 | HMPREF9269_0054 | hypothetical protein |
| 2040 | AEBA01000149.1 | EFK78758.1 JB | 1146 [NA] | 381 [AA] | 7095-8240 | HMPREF9269_0060 | tRNA-guanine transglycosylase |
| 2041 | AEBA01000149.1 | EFK78759.1 JB | 1044 [NA] | 347 [AA] | 8256-9299 | HMPREF9269_0061 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
| 2042 | AEBA01000149.1 | EFK78760.1 JB | 606 [NA] | 201 [AA] | 10354-10959 | HMPREF9269_0063 | Holliday junction DNA helicase RuvA |
| 2043 | AEBA01000149.1 | EFK78761.1 JB | 732 [NA] | 243 [AA] | 45-776 | HMPREF9269_0051 | hypothetical protein |
| 2044 | AEBA01000149.1 | EFK78762.1 JB | 1278 [NA] | 425 [AA] | 29783-31060 | HMPREF9269_0079 | transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein |
| 2045 | AEBA01000149.1 | EFK78763.1 JB | 1011 [NA] | 336 [AA] | 9305-10315 | HMPREF9269_0062 | Holliday junction DNA helicase RuvB |
| 2046 | AEBA01000149.1 | EFK78764.1 JB | 225 [NA] | 74 [AA] | 21223-21447 | HMPREF9269_0071 | hypothetical protein |
| 2047 | AEBA01000149.1 | EFK78765.1 JB | 807 [NA] | 268 [AA] | 2287-3093 | HMPREF9269_0053 | cysteine-rich domain protein |
| 2048 | AEBA01000149.1 | EFK78766.1 JB | 1518 [NA] | 505 [AA] | 769-2286 | HMPREF9269_0052 | iron-sulfur cluster-binding protein |
| 2049 | AEBA01000149.1 | EFK78767.1 JB | 588 [NA] | 195 [AA] | 18841-19428 | HMPREF9269_0068 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
| 2050 | AEBA01000149.1 | EFK78768.1 JB | 1146 [NA] | 381 [AA] | 17503-18648 | HMPREF9269_0067 | RecA protein |
| 2051 | AEBA01000149.1 | EFK78769.1 JB | 1566 [NA] | 521 [AA] | 15763-17328 | HMPREF9269_0066 | YmdA/YtgF family protein |
| 2052 | AEBA01000149.1 | EFK78770.1 JB | 516 [NA] | 171 [AA] | 27862-28377 | HMPREF9269_0077 | putative YbaK/EbsC protein |
| 2053 | AEBA01000149.1 | EFK78771.1 JB | 1092 [NA] | 363 [AA] | 21434-22525 | HMPREF9269_0072 | peptidase M16 inactive domain protein |
| 2054 | AEBA01000149.1 | EFK78772.1 JB | 852 [NA] | 283 [AA] | 27011-27862 | HMPREF9269_0076 | methyltransferase domain protein |
| 2055 | AEBA01000149.1 | EFK78773.1 JB | 747 [NA] | 248 [AA] | 4102-4848 | HMPREF9269_0055 | amino acid permease |
| 2056 | AEBA01000149.1 | EFK78774.1 JB | 2631 [NA] | 876 [AA] | 12965-15595 | HMPREF9269_0065 | DNA mismatch repair protein MutS |
| 2057 | AEBA01000149.1 | EFK78775.1 JB | 930 [NA] | 309 [AA] | 19481-20410 | HMPREF9269_0069 | hypothetical protein |
| 2058 | AEBA01000149.1 | EFK78776.1 JB | 381 [NA] | 126 [AA] | 6648-7028 | HMPREF9269_0059 | preprotein translocase, YajC subunit |
| 2059 | AEBA01000149.1 | EFK78777.1 JB | 513 [NA] | 170 [AA] | 26258-26770 | HMPREF9269_0075 | RNA methyltransferase, TrmH family, group 2 |
| 2060 | AEBA01000149.1 | EFK78778.1 JB | 2280 [NA] | 759 [AA] | 23942-26221 | HMPREF9269_0074 | FtsK/SpoIIIE family protein |
| 2061 | AEBA01000149.1 | EFK78779.1 JB | 1263 [NA] | 420 [AA] | 22538-23800 | HMPREF9269_0073 | peptidase M16 inactive domain protein |
| 2062 | AEBA01000149.1 | EFK78780.1 JB | 297 [NA] | 98 [AA] | 6199-6495 | HMPREF9269_0058 | hypothetical protein |
| 2063 | AEBA01000149.1 | EFK78781.1 JB | 1980 [NA] | 659 [AA] | 10976-12955 | HMPREF9269_0064 | DNA mismatch repair domain protein |
| 2064 | AEBA01000149.1 | EFK78782.1 JB | 726 [NA] | 241 [AA] | 20492-21217 | HMPREF9269_0070 | oxidoreductase, short chain dehydrogenase/reductase family protein |
| 2065 | AEBA01000149.1 | EFK78783.1 JB | 441 [NA] | 146 [AA] | 5035-5475 | HMPREF9269_0056 | hypothetical protein |
| 2066 | AEBA01000149.1 | EFK78784.1 JB | 978 [NA] | 325 [AA] | 28602-29579 | HMPREF9269_0078 | GMP reductase |
| 2067 | AEBA01000149.1 | EFK78785.1 JB | 453 [NA] | 150 [AA] | 5644-6096 | HMPREF9269_0057 | universal stress family protein |
| 2068 | AEBA01000150.1 | EFK78751.1 JB | 249 [NA] | 82 [AA] | 919-1167 | HMPREF9269_1516 | hypothetical protein |
| 2069 | AEBA01000150.1 | EFK78752.1 JB | 528 [NA] | 175 [AA] | 4456-4983 | HMPREF9269_1520 | peptidase, M23 family |
| 2070 | AEBA01000150.1 | EFK78753.1 JB | 735 [NA] | 244 [AA] | 1215-1949 | HMPREF9269_1517 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase |
| 2071 | AEBA01000150.1 | EFK78754.1 JB | 903 [NA] | 301 [AA] | <1-903 | HMPREF9269_1515 | hypothetical protein |
| 2072 | AEBA01000150.1 | EFK78755.1 JB | 1545 [NA] | 514 [AA] | 2884-4428 | HMPREF9269_1519 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase |
| 2073 | AEBA01000150.1 | EFK78756.1 JB | 867 [NA] | 288 [AA] | 1954-2820 | HMPREF9269_1518 | hypothetical protein |
| 2074 | AEBA01000151.1 | EFK78741.1 JB | 1164 [NA] | 387 [AA] | 8071-9234 | HMPREF9269_0361 | transporter, major facilitator family protein |
| 2075 | AEBA01000151.1 | EFK78742.1 JB | 1500 [NA] | 499 [AA] | 4243-5742 | HMPREF9269_0358 | ABC transporter, permease protein |
| 2076 | AEBA01000151.1 | EFK78743.1 JB | 1557 [NA] | 518 [AA] | 158-1714 | HMPREF9269_0354 | GMP synthase (glutamine-hydrolyzing) domain protein |
| 2077 | AEBA01000151.1 | EFK78744.1 JB | 594 [NA] | 197 [AA] | 2838-3431 | HMPREF9269_0356 | GDSL-like protein |
| 2078 | AEBA01000151.1 | EFK78745.1 JB | 999 [NA] | 332 [AA] | 9308-10306 | HMPREF9269_0362 | glycosyltransferase, group 2 family protein |
| 2079 | AEBA01000151.1 | EFK78746.1 JB | 921 [NA] | 306 [AA] | 1811-2731 | HMPREF9269_0355 | pantothenate kinase |
| 2080 | AEBA01000151.1 | EFK78747.1 JB | 1491 [NA] | 496 [AA] | 5971-7461 | HMPREF9269_0359 | amino acid permease |
| 2081 | AEBA01000151.1 | EFK78748.1 JB | 807 [NA] | 268 [AA] | 10388->11194 | HMPREF9269_0363 | hypothetical protein |
| 2082 | AEBA01000151.1 | EFK78749.1 JB | 741 [NA] | 246 [AA] | 3510-4250 | HMPREF9269_0357 | ABC transporter, ATP-binding protein |
| 2083 | AEBA01000151.1 | EFK78750.1 JB | 324 [NA] | 107 [AA] | 7744-8067 | HMPREF9269_0360 | MazG nucleotide pyrophosphohydrolase domain protein |
| 2084 | AEBA01000152.1 | EFK78739.1 JB | 771 [NA] | 256 [AA] | 65-835 | HMPREF9269_0012 | transposase |
| 2085 | AEBA01000152.1 | EFK78740.1 JB | 4005 [NA] | 1334 [AA] | 1453-5457 | HMPREF9269_0013 | LPXTG-motif cell wall anchor domain protein |
| 2086 | AEBA01000153.1 | EFK78704.1 JB | 1821 [NA] | 606 [AA] | 6959-8779 | HMPREF9269_0307 | ATPase family associated with various cellular activities (AAA) |
| 2087 | AEBA01000153.1 | EFK78705.1 JB | 2106 [NA] | 701 [AA] | 48-2153 | HMPREF9269_0302 | hypothetical protein |
| 2088 | AEBA01000153.1 | EFK78706.1 JB | 555 [NA] | 184 [AA] | 21758-22312 | HMPREF9269_0319 | hypothetical protein |
| 2089 | AEBA01000153.1 | EFK78707.1 JB | 606 [NA] | 201 [AA] | 29716-30321 | HMPREF9269_0330 | response regulator receiver domain protein |
| 2090 | AEBA01000153.1 | EFK78708.1 JB | 1164 [NA] | 387 [AA] | 2367-3530 | HMPREF9269_0303 | hypothetical protein |
| 2091 | AEBA01000153.1 | EFK78709.1 JB | 315 [NA] | 104 [AA] | 17324-17638 | HMPREF9269_0313 | hypothetical protein |
| 2092 | AEBA01000153.1 | EFK78710.1 JB | 141 [NA] | 46 [AA] | 31298-31438 | HMPREF9269_0333 | hypothetical protein |
| 2093 | AEBA01000153.1 | EFK78711.1 JB | 123 [NA] | 40 [AA] | 17644-17766 | HMPREF9269_0314 | hypothetical protein |
| 2094 | AEBA01000153.1 | EFK78712.1 JB | 1281 [NA] | 426 [AA] | 20465-21745 | HMPREF9269_0318 | CHAP domain protein |
| 2095 | AEBA01000153.1 | EFK78713.1 JB | 684 [NA] | 227 [AA] | 26057-26740 | HMPREF9269_0326 | ribose 5-phosphate isomerase A |
| 2096 | AEBA01000153.1 | EFK78714.1 JB | 648 [NA] | 215 [AA] | 25393-26040 | HMPREF9269_0325 | ribulose-phosphate 3-epimerase |
| 2097 | AEBA01000153.1 | EFK78715.1 JB | 420 [NA] | 139 [AA] | 6529-6948 | HMPREF9269_0306 | hypothetical protein |
| 2098 | AEBA01000153.1 | EFK78716.1 JB | 2313 [NA] | 770 [AA] | 14898-17210 | HMPREF9269_0312 | hypothetical protein |
| 2099 | AEBA01000153.1 | EFK78717.1 JB | 231 [NA] | 76 [AA] | 18078-18308 | HMPREF9269_0315 | hypothetical protein |
| 2100 | AEBA01000153.1 | EFK78718.1 JB | 525 [NA] | 174 [AA] | 24798-25322 | HMPREF9269_0324 | hypothetical protein |
| 2101 | AEBA01000153.1 | EFK78719.1 JB | 339 [NA] | 112 [AA] | 9153-9491 | HMPREF9269_0309 | hypothetical protein |
| 2102 | AEBA01000153.1 | EFK78720.1 JB | 198 [NA] | 65 [AA] | 20257-20454 | HMPREF9269_0317 | hypothetical protein |
| 2103 | AEBA01000153.1 | EFK78721.1 JB | 225 [NA] | 74 [AA] | 32339-32563 | HMPREF9269_0335 | hypothetical protein |
| 2104 | AEBA01000153.1 | EFK78722.1 JB | 876 [NA] | 291 [AA] | 26977-27852 | HMPREF9269_0327 | ABC transporter, ATP-binding protein |
| 2105 | AEBA01000153.1 | EFK78723.1 JB | 1929 [NA] | 642 [AA] | 18327-20255 | HMPREF9269_0316 | hypothetical protein |
| 2106 | AEBA01000153.1 | EFK78724.1 JB | 1110 [NA] | 369 [AA] | 28604-29713 | HMPREF9269_0329 | histidine kinase |
| 2107 | AEBA01000153.1 | EFK78725.1 JB | 288 [NA] | 95 [AA] | 8791-9078 | HMPREF9269_0308 | hypothetical protein |
| 2108 | AEBA01000153.1 | EFK78726.1 JB | 282 [NA] | 93 [AA] | 23088-23369 | HMPREF9269_0321 | hypothetical protein |
| 2109 | AEBA01000153.1 | EFK78727.1 JB | 306 [NA] | 101 [AA] | 30870-31175 | HMPREF9269_0332 | hypothetical protein |
| 2110 | AEBA01000153.1 | EFK78728.1 JB | 2337 [NA] | 778 [AA] | 9621-11957 | HMPREF9269_0310 | hypothetical protein |
| 2111 | AEBA01000153.1 | EFK78729.1 JB | 750 [NA] | 249 [AA] | 23801-24550 | HMPREF9269_0323 | site-specific recombinase, phage integrase family |
| 2112 | AEBA01000153.1 | EFK78730.1 JB | 2865 [NA] | 954 [AA] | 12032-14896 | HMPREF9269_0311 | hypothetical protein |
| 2113 | AEBA01000153.1 | EFK78731.1 JB | 654 [NA] | 217 [AA] | 22325-22978 | HMPREF9269_0320 | hypothetical protein |
| 2114 | AEBA01000153.1 | EFK78732.1 JB | 234 [NA] | 77 [AA] | 32609-32842 | HMPREF9269_0336 | hypothetical protein |
| 2115 | AEBA01000153.1 | EFK78733.1 JB | 711 [NA] | 236 [AA] | 5800-6510 | HMPREF9269_0305 | hypothetical protein |
| 2116 | AEBA01000153.1 | EFK78734.1 JB | 2241 [NA] | 746 [AA] | 3542-5782 | HMPREF9269_0304 | putative DNA topoisomerase |
| 2117 | AEBA01000153.1 | EFK78735.1 JB | 498 [NA] | 165 [AA] | 30394-30891 | HMPREF9269_0331 | hypothetical protein |
| 2118 | AEBA01000153.1 | EFK78736.1 JB | 336 [NA] | 111 [AA] | 23436-23771 | HMPREF9269_0322 | site-specific recombinase, phage integrase family |
| 2119 | AEBA01000153.1 | EFK78737.1 JB | 852 [NA] | 283 [AA] | 31395-32246 | HMPREF9269_0334 | linear amide C-N hydrolase, choloylglycine hydrolase family protein |
| 2120 | AEBA01000153.1 | EFK78738.1 JB | 753 [NA] | 250 [AA] | 27852-28604 | HMPREF9269_0328 | ABC-2 type transporter |
| 2121 | AEBA01000154.1 | EFK78703.1 JB | 634 [NA] | 211 [AA] | 223->856 | HMPREF9269_1879 | CRISPR-associated endonuclease Cas1, NMENI subtype |