Genome Explorer: Escherichia coli O103 (SEQF1712.1)
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NCBI Annotation for SEQF1712.1
| Genome selected: Escherichia coli O103 | |||
| Contigs: | 2 | Bases: | 5524860 bps |
| CDS: | 233 | rRNA: | 22 |
| tmRNA: | 1 | tRNA: | 98 |
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| # | Molecule | PID | NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|
| 5001 | AP010958.1 | BAI33884.1 JB | 366 [NA] | 121 [AA] | 5393863-5394228 | ECO103_5209 | putative DNase |
| 5002 | AP010958.1 | BAI33885.1 JB | 564 [NA] | 187 [AA] | 5394518-5395081 | ECO103_5210 | putative terminase small subunit |
| 5003 | AP010958.1 | BAI33886.1 JB | 1662 [NA] | 553 [AA] | 5395078-5396739 | ECO103_5211 | putative large terminase subunit |
| 5004 | AP010958.1 | BAI33887.1 JB | 1938 [NA] | 645 [AA] | 5396803-5398740 | ECO103_5212 | putative head protein/prohead protease |
| 5005 | AP010958.1 | BAI33888.1 JB | 222 [NA] | 73 [AA] | 5398785-5399006 | ECO103_5213 | hypothetical protein |
| 5006 | AP010958.1 | BAI33889.1 JB | 1365 [NA] | 454 [AA] | 5398952-5400316 | ECO103_5214 | putative portal protein |
| 5007 | AP010958.1 | BAI33890.1 JB | 1224 [NA] | 407 [AA] | 5400313-5401536 | ECO103_5215 | putative portal protein-like protein |
| 5008 | AP010958.1 | BAI33891.1 JB | 327 [NA] | 108 [AA] | 5401533-5401859 | ECO103_5216 | putative DNA packaging protein |
| 5009 | AP010958.1 | BAI33892.1 JB | 351 [NA] | 116 [AA] | 5401869-5402219 | ECO103_5217 | putative head-tail adaptor |
| 5010 | AP010958.1 | BAI33893.1 JB | 447 [NA] | 148 [AA] | 5402216-5402662 | ECO103_5218 | putative minor tail protein |
| 5011 | AP010958.1 | BAI33894.1 JB | 345 [NA] | 114 [AA] | 5402659-5403003 | ECO103_5219 | hypothetical protein |
| 5012 | AP010958.1 | BAI33895.1 JB | 717 [NA] | 238 [AA] | 5403062-5403778 | ECO103_5220 | putative major tail protein |
| 5013 | AP010958.1 | BAI33896.1 JB | 375 [NA] | 124 [AA] | 5403784-5404158 | ECO103_5221 | putative minor tail protein |
| 5014 | AP010958.1 | BAI33897.1 JB | 282 [NA] | 93 [AA] | 5404182-5404463 | ECO103_5222 | putative tail assembly protein |
| 5015 | AP010958.1 | BAI33898.1 JB | 3243 [NA] | 1080 [AA] | 5404511-5407753 | ECO103_5223 | putative tail length tape measure protein |
| 5016 | AP010958.1 | BAI33899.1 JB | 342 [NA] | 113 [AA] | 5407746-5408087 | ECO103_5224 | putative minor tail protein |
| 5017 | AP010958.1 | BAI33900.1 JB | 699 [NA] | 232 [AA] | 5408087-5408785 | ECO103_5225 | putative minor tail protein |
| 5018 | AP010958.1 | BAI33901.1 JB | 744 [NA] | 247 [AA] | 5408796-5409539 | ECO103_5226 | putative tail assembly protein |
| 5019 | AP010958.1 | BAI33902.1 JB | 681 [NA] | 226 [AA] | 5409437-5410117 | ECO103_5227 | putative tail assembly protein |
| 5020 | AP010958.1 | BAI33903.1 JB | 3477 [NA] | 1158 [AA] | 5410356-5413832 | ECO103_5228 | putative host specificity protein |
| 5021 | AP010958.1 | BAI33904.1 JB | 600 [NA] | 199 [AA] | 5413899-5414498 | ECO103_5229 | putative outer membrane precursor Lom |
| 5022 | AP010958.1 | BAI33905.1 JB | 1314 [NA] | 437 [AA] | 5414563-5415876 | ECO103_5230 | putative side tail fiber protein |
| 5023 | AP010958.1 | BAI33906.1 JB | 270 [NA] | 89 [AA] | 5415878-5416147 | ECO103_5231 | conserved predicted protein |
| 5024 | AP010958.1 | BAI33907.1 JB | 651 [NA] | 216 [AA] | 5416432-5417082 | ECO103_5232 | T3SS secreted effector NleG-like protein |
| 5025 | AP010958.1 | BAI33908.1 JB | 261 [NA] | 86 [AA] | 5417675-5417935 | ECO103_5234 | putative DNA damage-inducible protein |
| 5026 | AP010958.1 | BAI33909.1 JB | 1587 [NA] | 528 [AA] | 5418155-5419741 | ECO103_5235 | peptide chain release factor RF-3 |
| 5027 | AP010958.1 | BAI33910.1 JB | 606 [NA] | 201 [AA] | 5420134-5420739 | ECO103_5236 | periplasmic protein OsmY |
| 5028 | AP010958.1 | BAI33911.1 JB | 162 [NA] | 53 [AA] | 5420866-5421027 | ECO103_5237 | hypothetical protein |
| 5029 | AP010958.1 | BAI33912.1 JB | 1074 [NA] | 357 [AA] | 5421149-5422222 | ECO103_5238 | predicted esterase |
| 5030 | AP010958.1 | BAI33913.1 JB | 783 [NA] | 260 [AA] | 5422219-5423001 | ECO103_5239 | predicted DNase |
| 5031 | AP010958.1 | BAI33914.1 JB | 864 [NA] | 287 [AA] | 5423416-5424279 | ECO103_5240 | predicted pyruvate formate lyase activating enzyme |
| 5032 | AP010958.1 | BAI33915.1 JB | 1551 [NA] | 516 [AA] | 5424251-5425801 | ECO103_5241 | conserved predicted protein |
| 5033 | AP010958.1 | BAI33916.1 JB | 780 [NA] | 259 [AA] | 5426059-5426838 | ECO103_5242 | 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked DeoC |
| 5034 | AP010958.1 | BAI33917.1 JB | 1323 [NA] | 440 [AA] | 5426965-5428287 | ECO103_5243 | thymidine phosphorylase |
| 5035 | AP010958.1 | BAI33918.1 JB | 1224 [NA] | 407 [AA] | 5428339-5429562 | ECO103_5244 | phosphopentomutase DeoB |
| 5036 | AP010958.1 | BAI33919.1 JB | 720 [NA] | 239 [AA] | 5429642-5430361 | ECO103_5245 | purine-nucleoside phosphorylase DeoD |
| 5037 | AP010958.1 | BAI33920.1 JB | 1017 [NA] | 338 [AA] | 5430817-5431833 | ECO103_5247 | lipoate-protein ligase A |
| 5038 | AP010958.1 | BAI33921.1 JB | 645 [NA] | 214 [AA] | 5431861-5432505 | ECO103_5248 | hypothetical protein |
| 5039 | AP010958.1 | BAI33922.1 JB | 969 [NA] | 322 [AA] | 5432611-5433579 | ECO103_5249 | 3-phosphoserine phosphatase SerB |
| 5040 | AP010958.1 | BAI33923.1 JB | 1383 [NA] | 460 [AA] | 5433628-5435010 | ECO103_5250 | predicted repair protein RadA |
| 5041 | AP010958.1 | BAI33924.1 JB | 1233 [NA] | 410 [AA] | 5435031-5436263 | ECO103_5251 | bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase NadR |
| 5042 | AP010958.1 | BAI33925.1 JB | 1668 [NA] | 555 [AA] | 5436570-5438237 | ECO103_5252 | fused predicted transporter subunits of ABC superfamily: ATP-binding components |
| 5043 | AP010958.1 | BAI33926.1 JB | 1938 [NA] | 645 [AA] | 5438448-5440385 | ECO103_5253 | lytic murein transglycosylase Slt, soluble |
| 5044 | AP010958.1 | BAI33927.1 JB | 327 [NA] | 108 [AA] | 5440475-5440801 | ECO103_5254 | DNA-binding transcriptional repressor TrpR, tryptophan-binding |
| 5045 | AP010958.1 | BAI33928.1 JB | 522 [NA] | 173 [AA] | 5440886-5441407 | ECO103_5255 | thiamin metabolism associated protein |
| 5046 | AP010958.1 | BAI33929.1 JB | 648 [NA] | 215 [AA] | 5441459-5442106 | ECO103_5256 | phosphoglyceromutase 2, co-factor independent |
| 5047 | AP010958.1 | BAI33930.1 JB | 870 [NA] | 289 [AA] | 5442103-5442972 | ECO103_5257 | DNA-binding transcriptional activator Rob |
| 5048 | AP010958.1 | BAI33931.1 JB | 474 [NA] | 157 [AA] | 5443183-5443656 | ECO103_5258 | conserved predicted protein |
| 5049 | AP010958.1 | BAI33932.1 JB | 690 [NA] | 229 [AA] | 5443669-5444358 | ECO103_5259 | DNA-binding response regulator CreB in two-component regulatory system with CreC |
| 5050 | AP010958.1 | BAI33933.1 JB | 1425 [NA] | 474 [AA] | 5444358-5445782 | ECO103_5260 | sensory histidine kinase CreC in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon |
| 5051 | AP010958.1 | BAI33934.1 JB | 1353 [NA] | 450 [AA] | 5445840-5447192 | ECO103_5261 | inner membrane protein CreD |
| 5052 | AP010958.1 | BAI33935.1 JB | 717 [NA] | 238 [AA] | 5447252-5447968 | ECO103_5262 | DNA-binding response regulator ArcA in two-component regulatory system with ArcB or CpxA |
| 5053 | AP010958.1 | BAI33936.1 JB | 141 [NA] | 46 [AA] | 5448064-5448204 | ECO103_5263 | conserved predicted protein |
| 5054 | AP010958.1 | BAI33937.1 JB | 687 [NA] | 228 [AA] | 5448604-5449290 | ECO103_5264 | predicted rRNA methyltransferase |
| 5055 | AP010959.1 | BAI33938.1 JB | 2661 [NA] | 886 [AA] | 1-2661 | ECO103_p01 | putative stcE protein |
| 5056 | AP010959.1 | BAI33939.1 JB | 876 [NA] | 291 [AA] | 2745-3620 | ECO103_p02 | type II secretion protein EtpC |
| 5057 | AP010959.1 | BAI33940.1 JB | 1971 [NA] | 656 [AA] | 3621-5591 | ECO103_p03 | type II secretion protein EtpD |
| 5058 | AP010959.1 | BAI33941.1 JB | 1503 [NA] | 500 [AA] | 5588-7090 | ECO103_p04 | type II secretion protein EtpE |
| 5059 | AP010959.1 | BAI33942.1 JB | 1224 [NA] | 407 [AA] | 7092-8315 | ECO103_p05 | type II secretion protein EtpF |
| 5060 | AP010959.1 | BAI33943.1 JB | 435 [NA] | 144 [AA] | 8346-8780 | ECO103_p06 | type II secretion protein EtpG |
| 5061 | AP010959.1 | BAI33944.1 JB | 552 [NA] | 183 [AA] | 8777-9328 | ECO103_p07 | type II secretion protein EtpH |
| 5062 | AP010959.1 | BAI33945.1 JB | 366 [NA] | 121 [AA] | 9325-9690 | ECO103_p08 | type II secretion protein EtpI |
| 5063 | AP010959.1 | BAI33946.1 JB | 600 [NA] | 199 [AA] | 9687-10286 | ECO103_p09 | type II secretion protein EtpJ |
| 5064 | AP010959.1 | BAI33947.1 JB | 978 [NA] | 325 [AA] | 10283-11260 | ECO103_p10 | type II secretion protein EtpK |
| 5065 | AP010959.1 | BAI33948.1 JB | 1278 [NA] | 425 [AA] | 11194-12471 | ECO103_p11 | type II secretion protein EtpL |
| 5066 | AP010959.1 | BAI33949.1 JB | 516 [NA] | 171 [AA] | 12458-12973 | ECO103_p12 | type II secretion protein EtpM |
| 5067 | AP010959.1 | BAI33950.1 JB | 834 [NA] | 277 [AA] | 13025-13858 | ECO103_p13 | putative type II secretion protein EtpN |
| 5068 | AP010959.1 | BAI33951.1 JB | 402 [NA] | 133 [AA] | 13952-14353 | ECO103_p14 | putative type II secretion protein etpO |
| 5069 | AP010959.1 | BAI33952.1 JB | 327 [NA] | 108 [AA] | 15292-15618 | ECO103_p16 | putative IS629 transposase OrfA |
| 5070 | AP010959.1 | BAI33953.1 JB | 888 [NA] | 295 [AA] | 15618-16505 | ECO103_p17 | putative IS629 transposase OrfB |
| 5071 | AP010959.1 | BAI33954.1 JB | 822 [NA] | 273 [AA] | 17967-18788 | ECO103_p20 | putative polysaccharide deacetylase |
| 5072 | AP010959.1 | BAI33955.1 JB | 1104 [NA] | 367 [AA] | 18791-19894 | ECO103_p21 | putative LPS -1,7-N-acetylglucosamine transferase |
| 5073 | AP010959.1 | BAI33956.1 JB | 1722 [NA] | 573 [AA] | 19984-21705 | ECO103_p22 | putative membrane protein |
| 5074 | AP010959.1 | BAI33957.1 JB | 1032 [NA] | 343 [AA] | 21746-22777 | ECO103_p23 | putative lipid A myristoyl transferase MsbB2 |
| 5075 | AP010959.1 | BAI33958.1 JB | 888 [NA] | 295 [AA] | 23262-24149 | ECO103_p25 | putative IS629 transposase OrfB |
| 5076 | AP010959.1 | BAI33959.1 JB | 327 [NA] | 108 [AA] | 24149-24475 | ECO103_p26 | putative IS629 transposase OrfA |
| 5077 | AP010959.1 | BAI33960.1 JB | 354 [NA] | 117 [AA] | 24727-25080 | ECO103_p27 | putative colicin M resistance protein |
| 5078 | AP010959.1 | BAI33961.1 JB | 462 [NA] | 153 [AA] | 24955-25416 | ECO103_p28 | hypothetical protein |
| 5079 | AP010959.1 | BAI33962.1 JB | 1440 [NA] | 479 [AA] | 25483-26922 | ECO103_p29 | hemolysin D |
| 5080 | AP010959.1 | BAI33963.1 JB | 2121 [NA] | 706 [AA] | 26926-29046 | ECO103_p30 | hemolysin B |
| 5081 | AP010959.1 | BAI33964.1 JB | 2997 [NA] | 998 [AA] | 29096-32092 | ECO103_p31 | hemolysin A |
| 5082 | AP010959.1 | BAI33965.1 JB | 516 [NA] | 171 [AA] | 32094-32609 | ECO103_p32 | hemolysin C |
| 5083 | AP010959.1 | BAI33966.1 JB | 327 [NA] | 108 [AA] | 33043-33369 | ECO103_p33 | putative IS629 transposase OrfA |
| 5084 | AP010959.1 | BAI33967.1 JB | 888 [NA] | 295 [AA] | 33369-34256 | ECO103_p34 | putative IS629 transposase OrfB |
| 5085 | AP010959.1 | BAI33968.1 JB | 498 [NA] | 165 [AA] | 38024-38521 | ECO103_p38 | probable TraS protein |
| 5086 | AP010959.1 | BAI33969.1 JB | 732 [NA] | 243 [AA] | 38553-39284 | ECO103_p39 | putative TraT protein |
| 5087 | AP010959.1 | BAI33970.1 JB | 888 [NA] | 295 [AA] | 39600-40487 | ECO103_p40 | putative IS629 transposase OrfB |
| 5088 | AP010959.1 | BAI33971.1 JB | 327 [NA] | 108 [AA] | 40487-40813 | ECO103_p41 | putative IS629 transposase OrfA |
| 5089 | AP010959.1 | BAI33972.1 JB | 5268 [NA] | 1755 [AA] | 43006-48273 | ECO103_p44 | putative TraI protein |
| 5090 | AP010959.1 | BAI33973.1 JB | 747 [NA] | 248 [AA] | 48293-49039 | ECO103_p45 | putative traX protein |
| 5091 | AP010959.1 | BAI33974.1 JB | 861 [NA] | 286 [AA] | 49098-49958 | ECO103_p46 | predicted hydrolase |
| 5092 | AP010959.1 | BAI33975.1 JB | 561 [NA] | 186 [AA] | 50061-50621 | ECO103_p47 | putative Fertility inhibition protein FinQ |
| 5093 | AP010959.1 | BAI33976.1 JB | 252 [NA] | 83 [AA] | 50758-51009 | ECO103_p48 | conserved predicted protein |
| 5094 | AP010959.1 | BAI33977.1 JB | 462 [NA] | 153 [AA] | 51211-51672 | ECO103_p49 | putative endonuclease |
| 5095 | AP010959.1 | BAI33978.1 JB | 210 [NA] | 69 [AA] | 51718-51927 | ECO103_p50 | putative hemolysin expression modulating protein |
| 5096 | AP010959.1 | BAI33979.1 JB | 888 [NA] | 295 [AA] | 52292-53179 | ECO103_p52 | putative IS629 transposase OrfB |
| 5097 | AP010959.1 | BAI33980.1 JB | 327 [NA] | 108 [AA] | 53179-53505 | ECO103_p53 | putative IS629 transposase OrfA |
| 5098 | AP010959.1 | BAI33981.1 JB | 438 [NA] | 145 [AA] | 53959-54396 | ECO103_p55 | hypothetical protein |
| 5099 | AP010959.1 | BAI33982.1 JB | 180 [NA] | 59 [AA] | 54645-54824 | ECO103_p56 | hypothetical protein |
| 5100 | AP010959.1 | BAI33983.1 JB | 375 [NA] | 124 [AA] | 55027-55401 | ECO103_p57 | hypothetical protein |
| 5101 | AP010959.1 | BAI33984.1 JB | 741 [NA] | 246 [AA] | 56188-56928 | ECO103_p59 | putative recombinase |
| 5102 | AP010959.1 | BAI33985.1 JB | 978 [NA] | 325 [AA] | 57212-58189 | ECO103_p60 | putative RepFIB replication protein A |
| 5103 | AP010959.1 | BAI33986.1 JB | 165 [NA] | 54 [AA] | 58469-58633 | ECO103_p61 | hypothetical protein |
| 5104 | AP010959.1 | BAI33987.1 JB | 288 [NA] | 95 [AA] | 59242-59529 | ECO103_p63 | putative plasmid stability protein |
| 5105 | AP010959.1 | BAI33988.1 JB | 252 [NA] | 83 [AA] | 59526-59777 | ECO103_p64 | putative plasmid stability protein |
| 5106 | AP010959.1 | BAI33989.1 JB | 171 [NA] | 56 [AA] | 59951-60121 | ECO103_p65 | hypothetical protein |
| 5107 | AP010959.1 | BAI33990.1 JB | 1206 [NA] | 401 [AA] | 60495-61700 | ECO103_p66 | putative partitioning protein A |
| 5108 | AP010959.1 | BAI33991.1 JB | 963 [NA] | 320 [AA] | 61697-62659 | ECO103_p67 | putative partitioning protein B |
| 5109 | AP010959.1 | BAI33992.1 JB | 771 [NA] | 256 [AA] | 64211-64981 | ECO103_p71 | hypothetical protein |
| 5110 | AP010959.1 | BAI33993.1 JB | 222 [NA] | 73 [AA] | 65330-65551 | ECO103_p73 | conserved predicted protein |
| 5111 | AP010959.1 | BAI33994.1 JB | 435 [NA] | 144 [AA] | 65563-65997 | ECO103_p74 | hypothetical protein |
| 5112 | AP010959.1 | BAI33995.1 JB | 777 [NA] | 258 [AA] | 66043-66819 | ECO103_p75 | conserved predicted protein |
| 5113 | AP010959.1 | BAI33996.1 JB | 402 [NA] | 133 [AA] | 67236-67637 | ECO103_p77 | putative antirestriction protein |
| 5114 | AP010959.1 | BAI33997.1 JB | 423 [NA] | 140 [AA] | 67684-68106 | ECO103_p78 | hypothetical protein |
| 5115 | AP010959.1 | BAI33998.1 JB | 192 [NA] | 63 [AA] | 68103-68294 | ECO103_p79 | conserved predicted protein |
| 5116 | AP010959.1 | BAI33999.1 JB | 417 [NA] | 138 [AA] | 68377-68793 | ECO103_p80 | conserved predicted protein |
| 5117 | AP010959.1 | BAI34000.1 JB | 207 [NA] | 68 [AA] | 68840-69046 | ECO103_p81 | hypothetical protein |
| 5118 | AP010959.1 | BAI34001.1 JB | 510 [NA] | 169 [AA] | 72030-72539 | ECO103_p87 | putative transglycosylase |
| 5119 | AP010959.1 | BAI34002.1 JB | 384 [NA] | 127 [AA] | 72953-73336 | ECO103_p88 | putative conjugal transfer protein M TraM |
| 5120 | AP010959.1 | BAI34003.1 JB | 888 [NA] | 295 [AA] | 73701-74588 | ECO103_p89 | putative IS629 transposase OrfB |
| 5121 | AP010959.1 | BAI34004.1 JB | 327 [NA] | 108 [AA] | 74588-74914 | ECO103_p90 | putative IS629 transposase OrfA |