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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Gardnerella vaginalis UGent 09.48 (SEQF8000.1)
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PROKKA Annotation for SEQF8000.1
Genome selected: Gardnerella vaginalis UGent 09.48
Contigs:3 Bases:1470925 bps
CDS:1109 rRNA:3
tmRNA:1 tRNA:45
Annotation Table [page:3]
Number of Records Found: 1109 [3 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
1001 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01056 open 2031 [NA] 676 [AA] 1323552-1325582 hypothetical protein
1002 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01057 open 1347 [NA] 448 [AA] 1325598-1326944 hypothetical protein
1003 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01058 open 462 [NA] 153 [AA] 1327066-1327527 hypothetical protein
1004 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01059 open 1629 [NA] 542 [AA] 1327916-1329544 hypothetical protein
1005 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01060 open 861 [NA] 286 [AA] 1329997-1330857 hypothetical protein
1006 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01061 open 696 [NA] 231 [AA] 1331470-1332165 rplA 50S ribosomal protein L1
1007 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01062 open 432 [NA] 143 [AA] 1332180-1332611 rplK 50S ribosomal protein L11
1008 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01063 open 354 [NA] 117 [AA] 1333315-1333668 hypothetical protein
1009 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01064 open 1368 [NA] 455 [AA] 1334015-1335382 hypothetical protein
1010 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01065 open 141 [NA] 46 [AA] 1335499-1335639 hypothetical protein
1011 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01066 open 1011 [NA] 336 [AA] 1335569-1336579 hypothetical protein
1012 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01067 open 1908 [NA] 635 [AA] 1337382-1339289 Fimbrial subunit type 1
1013 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01068 open 2373 [NA] 790 [AA] 1339532-1341904 hypothetical protein
1014 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01069 open 912 [NA] 303 [AA] 1342237-1343148 nusG Transcription terminationantitermination protein NusG
1015 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01070 open 228 [NA] 75 [AA] 1343190-1343417 secE Protein translocase subunit SecE
1016 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01072 open 1239 [NA] 412 [AA] 1343687-1344925 aspC1 Aspartate aminotransferase
1017 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01073 open 1146 [NA] 381 [AA] 1345245-1346390 proB Glutamate 5-kinase
1018 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01074 open 1683 [NA] 560 [AA] 1346416-1348098 obg GTPase Obg
1019 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01075 open 252 [NA] 83 [AA] 1348246-1348497 rpmA 50S ribosomal protein L27
1020 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01076 open 309 [NA] 102 [AA] 1348531-1348839 rplU 50S ribosomal protein L21
1021 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01077 open 3288 [NA] 1095 [AA] 1349014-1352301 rne Ribonuclease E
1022 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01078 open 942 [NA] 313 [AA] 1352696-1353637 hypothetical protein
1023 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01079 open 396 [NA] 131 [AA] 1353653-1354048 hypothetical protein
1024 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01080 open 1440 [NA] 479 [AA] 1353859-1355298 dTTPUTP pyrophosphatase
1025 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01081 open 1077 [NA] 358 [AA] 1355332-1356408 thrB Homoserine kinase
1026 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01082 open 1374 [NA] 457 [AA] 1356427-1357800 hom Homoserine dehydrogenase
1027 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01083 open 993 [NA] 330 [AA] 1357862-1358854 hypothetical protein
1028 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01084 open 1143 [NA] 380 [AA] 1358956-1360098 ddl D-alanine--D-alanine ligase
1029 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01085 open 996 [NA] 331 [AA] 1360171-1361166 gpsA Glycerol-3-phosphate dehydrogenase [NAD(P)+]
1030 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01086 open 885 [NA] 294 [AA] 1361308-1362192 hypothetical protein
1031 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01087 open 864 [NA] 287 [AA] 1362213-1363076 mntB_2 Manganese transport system membrane protein MntB
1032 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01088 open 822 [NA] 273 [AA] 1363076-1363897 btuD_12 Vitamin B12 import ATP-binding protein BtuD
1033 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01089 open 1779 [NA] 592 [AA] 1363885-1365663 hypothetical protein
1034 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01090 open 2229 [NA] 742 [AA] 1365682-1367910 hypothetical protein
1035 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01091 open 1206 [NA] 401 [AA] 1367891-1369096 hypothetical protein
1036 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01092 open 2295 [NA] 764 [AA] 1369128-1371422 hypothetical protein
1037 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01093 open 555 [NA] 184 [AA] 1371675-1372229 pncA Nicotinamidasepyrazinamidase
1038 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01094 open 540 [NA] 179 [AA] 1372577-1373116 hypothetical protein
1039 SEQF8000.1_QJUW01000001.1 SEQF8000.1_01095 open 1251 [NA] 416 [AA] 1373250-1374500 hypothetical protein
1040 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01096 open 750 [NA] 249 [AA] 339-1088 cnbA Chloronitrobenzene nitroreductase
1041 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01097 open 282 [NA] 93 [AA] 1179-1460 hypothetical protein
1042 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01098 open 372 [NA] 123 [AA] 1641-2012 hypothetical protein
1043 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01099 open 1161 [NA] 386 [AA] 2174-3334 hypothetical protein
1044 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01100 open 672 [NA] 223 [AA] 3331-4002 liaR Transcriptional regulatory protein LiaR
1045 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01101 open 903 [NA] 300 [AA] 4478-5380 hypothetical protein
1046 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01102 open 705 [NA] 234 [AA] 5383-6087 yknY putative ABC transporter ATP-binding protein YknY
1047 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01103 open 1212 [NA] 403 [AA] 6071-7282 hypothetical protein
1048 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01104 open 525 [NA] 174 [AA] 7310-7834 hypothetical protein
1049 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01105 open 1263 [NA] 420 [AA] 7879-9141 hypothetical protein
1050 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01106 open 1572 [NA] 523 [AA] 9278-10849 dapL LL-diaminopimelate aminotransferase
1051 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01107 open 783 [NA] 260 [AA] 11436-12218 nfrA1 FMN reductase (NADPH)
1052 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01108 open 459 [NA] 152 [AA] 12287-12745 hypothetical protein
1053 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01109 open 711 [NA] 236 [AA] 12915-13625 gpm2 Acid phosphatase
1054 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01111 open 1344 [NA] 447 [AA] 13986-15329 hypothetical protein
1055 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01112 open 1014 [NA] 337 [AA] 15492-16505 cytR_2 HTH-type transcriptional repressor CytR
1056 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01113 open 843 [NA] 280 [AA] 16816-17658 melD Melibioseraffinosestachyose import permease protein MelD
1057 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01114 open 834 [NA] 277 [AA] 17655-18488 ngcG Diacetylchitobiose uptake system permease protein NgcG
1058 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01115 open 612 [NA] 203 [AA] 18677-19288 hypothetical protein
1059 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01116 open 2250 [NA] 749 [AA] 19472-21721 malQ_2 4-alpha-glucanotransferase
1060 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01117 open 2010 [NA] 669 [AA] 22001-24010 pulA Pullulanase
1061 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01118 open 924 [NA] 307 [AA] 24323-25246 dasC Diacetylchitobiose uptake system permease protein DasC
1062 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01119 open 1407 [NA] 468 [AA] 25243-26649 hypothetical protein
1063 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01120 open 1230 [NA] 409 [AA] 26809-28038 cycB Cyclodextrin-binding protein
1064 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01121 open 1701 [NA] 566 [AA] 28297-29997 treS Trehalose synthaseamylase TreS
1065 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01122 open 837 [NA] 278 [AA] 30075-30911 hypothetical protein
1066 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01123 open 1026 [NA] 341 [AA] 31060-32085 cytR_3 HTH-type transcriptional repressor CytR
1067 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01124 open 1386 [NA] 461 [AA] 32359-33744 hypothetical protein
1068 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01125 open 936 [NA] 311 [AA] 33792-34727 ngcF Diacetylchitobiose uptake system permease protein NgcF
1069 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01126 open 912 [NA] 303 [AA] 34724-35635 araQ_2 L-arabinose transport system permease protein AraQ
1070 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01127 open 2748 [NA] 915 [AA] 35762-38509 hypothetical protein
1071 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01129 open 1071 [NA] 356 [AA] 38808-39878 thiO Glycine oxidase
1072 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01130 open 207 [NA] 68 [AA] 40001-40207 hypothetical protein
1073 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01131 open 813 [NA] 270 [AA] 40297-41109 thiG_2 Thiazole synthase
1074 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01132 open 732 [NA] 243 [AA] 41146-41877 moeZ putative adenylyltransferasesulfurtransferase MoeZ
1075 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01133 open 1884 [NA] 627 [AA] 42146-44029 dnaK Chaperone protein DnaK
1076 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01134 open 696 [NA] 231 [AA] 44029-44724 grpE Protein GrpE
1077 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01135 open 1053 [NA] 350 [AA] 44851-45903 cbpA Curved DNA-binding protein
1078 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01136 open 597 [NA] 198 [AA] 45991-46587 hypothetical protein
1079 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01137 open 744 [NA] 247 [AA] 46738-47481 gph Phosphoglycolate phosphatase
1080 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01138 open 2325 [NA] 774 [AA] 47598-49922 ponA1_2 Penicillin-binding protein 1A
1081 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01139 open 1143 [NA] 380 [AA] 50095-51237 ino1 Inositol-3-phosphate synthase
1082 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01141 open 1317 [NA] 438 [AA] 51421-52737 hypothetical protein
1083 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01142 open 2856 [NA] 951 [AA] 52869-55724 topA DNA topoisomerase 1
1084 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01143 open 705 [NA] 234 [AA] 55772-56476 tmk Thymidylate kinase
1085 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01144 open 1179 [NA] 392 [AA] 56531-57709 hypothetical protein
1086 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01145 open 1080 [NA] 359 [AA] 57722-58801 galR HTH-type transcriptional regulator GalR
1087 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01146 open 267 [NA] 88 [AA] 58901-59167 ptsH Phosphocarrier protein HPr
1088 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01147 open 1659 [NA] 552 [AA] 59443-61101 ptsI Phosphoenolpyruvate-protein phosphotransferase
1089 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01148 open 450 [NA] 149 [AA] 61206-61655 hypothetical protein
1090 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01149 open 270 [NA] 89 [AA] 61719-61988 ulaB Ascorbate-specific PTS system EIIB component
1091 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01150 open 1533 [NA] 510 [AA] 62105-63637 ulaA_2 Ascorbate-specific PTS system EIIC component
1092 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01151 open 552 [NA] 183 [AA] 63861-64412 hypothetical protein
1093 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01152 open 1608 [NA] 535 [AA] 64524-66131 pepD Dipeptidase
1094 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01153 open 1518 [NA] 505 [AA] 66360-67877 fhs Formate--tetrahydrofolate ligase
1095 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01154 open 843 [NA] 280 [AA] 68093-68935 hypothetical protein
1096 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01155 open 903 [NA] 300 [AA] 69065-69967 rsmI Ribosomal RNA small subunit methyltransferase I
1097 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01156 open 264 [NA] 87 [AA] 69999-70262 hypothetical protein
1098 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01157 open 627 [NA] 208 [AA] 70253-70879 hypothetical protein
1099 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01158 open 1872 [NA] 623 [AA] 71184-73055 metG Methionine--tRNA ligase
1100 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01159 open 1542 [NA] 513 [AA] 73397-74938 pepC_2 Aminopeptidase C
1101 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01160 open 984 [NA] 327 [AA] 75399-76382 Putative peptide transport permease protein
1102 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01161 open 948 [NA] 315 [AA] 76407-77354 Putative peptide transport permease protein
1103 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01162 open 1890 [NA] 629 [AA] 77376-79265 putative ABC transporter ATP-binding protein
1104 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01163 open 1743 [NA] 580 [AA] 79589-81331 putative protein
1105 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01164 open 1815 [NA] 604 [AA] 81511-83325 Putative multidrug export ATP-bindingpermease protein
1106 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01165 open 1797 [NA] 598 [AA] 83328-85124 putative ABC transporter ATP-binding protein
1107 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01166 open 981 [NA] 326 [AA] 85179-86159 dtd3 D-aminoacyl-tRNA deacylase
1108 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01167 open 2634 [NA] 877 [AA] 86324-88957 kup Low affinity potassium transport system protein kup
1109 SEQF8000.1_QJUW01000002.1 SEQF8000.1_01168 open 816 [NA] 271 [AA] 88981-89796 hypothetical protein