Genome Explorer: Veillonella sp. hmt 780 CHU740 (SEQF4130.1)
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PROKKA Annotation for SEQF4130.1
Genome selected: Veillonella sp. hmt 780 CHU740 | |||
Contigs: | 35 | Bases: | 1893839 bps |
CDS: | 1622 | rRNA: | 4 |
tmRNA: | 1 | tRNA: | 43 |
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# | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
---|---|---|---|---|---|---|---|---|
1501 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01564 | open | 225 [NA] | 74 [AA] | 45090-45314 | hypothetical protein | |
1502 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01565 | open | 426 [NA] | 141 [AA] | 45424-45849 | sufU | Zinc-dependent sulfurtransferase SufU |
1503 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01566 | open | 1230 [NA] | 409 [AA] | 45863-47092 | sufS | Cysteine desulfurase SufS |
1504 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01567 | open | 1050 [NA] | 349 [AA] | 47107-48156 | hypothetical protein | |
1505 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01568 | open | 1410 [NA] | 469 [AA] | 48166-49575 | hypothetical protein | |
1506 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01569 | open | 744 [NA] | 247 [AA] | 49585-50328 | sufC | Vegetative protein 296 |
1507 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01570 | open | 1254 [NA] | 417 [AA] | 50866-52119 | lysA | Diaminopimelate decarboxylase |
1508 | SEQF4130.1_RQVD01000014.1 | SEQF4130.1_01571 | open | 420 [NA] | 139 [AA] | 52687-53106 | hypothetical protein | |
1509 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01572 | open | 357 [NA] | 118 [AA] | 253-609 | rpsJ | 30S ribosomal protein S10 |
1510 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01573 | open | 642 [NA] | 213 [AA] | 629-1270 | rplC | 50S ribosomal protein L3 |
1511 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01574 | open | 624 [NA] | 207 [AA] | 1296-1919 | rplD | 50S ribosomal protein L4 |
1512 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01575 | open | 285 [NA] | 94 [AA] | 1919-2203 | rplW | 50S ribosomal protein L23 |
1513 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01576 | open | 831 [NA] | 276 [AA] | 2227-3057 | rplB | 50S ribosomal protein L2 |
1514 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01577 | open | 282 [NA] | 93 [AA] | 3080-3361 | rpsS | 30S ribosomal protein S19 |
1515 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01578 | open | 336 [NA] | 111 [AA] | 3373-3708 | rplV | 50S ribosomal protein L22 |
1516 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01579 | open | 666 [NA] | 221 [AA] | 3727-4392 | rpsC | 30S ribosomal protein S3 |
1517 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01580 | open | 438 [NA] | 145 [AA] | 4392-4829 | rplP | 50S ribosomal protein L16 |
1518 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01581 | open | 201 [NA] | 66 [AA] | 4819-5019 | rpmC | 50S ribosomal protein L29 |
1519 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01582 | open | 261 [NA] | 86 [AA] | 5059-5319 | rpsQ | 30S ribosomal protein S17 |
1520 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01583 | open | 369 [NA] | 122 [AA] | 5344-5712 | rplN | 50S ribosomal protein L14 |
1521 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01584 | open | 318 [NA] | 105 [AA] | 5729-6046 | rplX | 50S ribosomal protein L24 |
1522 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01585 | open | 540 [NA] | 179 [AA] | 6075-6614 | rplE | 50S ribosomal protein L5 |
1523 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01586 | open | 270 [NA] | 89 [AA] | 6632-6901 | rpsN2 | Alternate 30S ribosomal protein S14 |
1524 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01587 | open | 399 [NA] | 132 [AA] | 6930-7328 | rpsH | 30S ribosomal protein S8 |
1525 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01588 | open | 546 [NA] | 181 [AA] | 7353-7898 | rplF | 50S ribosomal protein L6 |
1526 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01589 | open | 363 [NA] | 120 [AA] | 7930-8292 | rplR | 50S ribosomal protein L18 |
1527 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01590 | open | 501 [NA] | 166 [AA] | 8311-8811 | rpsE | 30S ribosomal protein S5 |
1528 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01591 | open | 180 [NA] | 59 [AA] | 8826-9005 | rpmD | 50S ribosomal protein L30 |
1529 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01592 | open | 441 [NA] | 146 [AA] | 9025-9465 | rplO | 50S ribosomal protein L15 |
1530 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01593 | open | 1263 [NA] | 420 [AA] | 9467-10729 | secY | Protein translocase subunit SecY |
1531 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01594 | open | 564 [NA] | 187 [AA] | 10741-11304 | adk | Adenylate kinase |
1532 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01595 | open | 771 [NA] | 256 [AA] | 11308-12078 | map | Methionine aminopeptidase 1 |
1533 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01596 | open | 219 [NA] | 72 [AA] | 12101-12319 | infA | Translation initiation factor IF-1 |
1534 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01597 | open | 114 [NA] | 37 [AA] | 12346-12459 | rpmJ | 50S ribosomal protein L36 |
1535 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01598 | open | 369 [NA] | 122 [AA] | 12482-12850 | rpsM | 30S ribosomal protein S13 |
1536 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01599 | open | 390 [NA] | 129 [AA] | 12866-13255 | rpsK | 30S ribosomal protein S11 |
1537 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01600 | open | 1008 [NA] | 335 [AA] | 13307-14314 | rpoA | DNA-directed RNA polymerase subunit alpha |
1538 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01601 | open | 339 [NA] | 112 [AA] | 14329-14667 | rplQ | 50S ribosomal protein L17 |
1539 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01602 | open | 1746 [NA] | 581 [AA] | 14781-16526 | hypothetical protein | |
1540 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01603 | open | 843 [NA] | 280 [AA] | 16878-17720 | ecfA1 | Energy-coupling factor transporter ATP-binding protein EcfA1 |
1541 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01604 | open | 870 [NA] | 289 [AA] | 17705-18574 | ecfA2_2 | Energy-coupling factor transporter ATP-binding protein EcfA2 |
1542 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01605 | open | 807 [NA] | 268 [AA] | 18564-19370 | ecfT_2 | Energy-coupling factor transporter transmembrane protein EcfT |
1543 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01606 | open | 792 [NA] | 263 [AA] | 19367-20158 | truA | tRNA pseudouridine synthase A |
1544 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01607 | open | 306 [NA] | 101 [AA] | 20298-20603 | hypothetical protein | |
1545 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01608 | open | 1371 [NA] | 456 [AA] | 20723-22093 | adeQ | Adenine permease AdeQ |
1546 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01609 | open | 417 [NA] | 138 [AA] | 22427-22843 | cymR | HTH-type transcriptional regulator CymR |
1547 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01610 | open | 438 [NA] | 145 [AA] | 22875-23312 | ohrR | Organic hydroperoxide resistance transcriptional regulator |
1548 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01611 | open | 1209 [NA] | 402 [AA] | 23469-24677 | sbnD_2 | Staphyloferrin B transporter |
1549 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01612 | open | 372 [NA] | 123 [AA] | 25001-25372 | hypothetical protein | |
1550 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01613 | open | 1368 [NA] | 455 [AA] | 25612-26979 | rcsC | Sensor histidine kinase RcsC |
1551 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01614 | open | 678 [NA] | 225 [AA] | 26980-27657 | arlR | Response regulator ArlR |
1552 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01615 | open | 489 [NA] | 162 [AA] | 27843-28331 | hypothetical protein | |
1553 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01616 | open | 717 [NA] | 238 [AA] | 28324-29040 | hypothetical protein | |
1554 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01617 | open | 669 [NA] | 222 [AA] | 29057-29725 | hypothetical protein | |
1555 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01618 | open | 501 [NA] | 166 [AA] | 29917-30417 | hypothetical protein | |
1556 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01619 | open | 498 [NA] | 165 [AA] | 30410-30907 | queF | NADPH-dependent 7-cyano-7-deazaguanine reductase |
1557 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01620 | open | 3390 [NA] | 1129 [AA] | 31021-34410 | addB | ATP-dependent helicasedeoxyribonuclease subunit B |
1558 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01621 | open | 3834 [NA] | 1277 [AA] | 34397-38230 | addA | ATP-dependent helicasenuclease subunit A |
1559 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01622 | open | 1425 [NA] | 474 [AA] | 38424-39848 | alsT | Amino-acid carrier protein AlsT |
1560 | SEQF4130.1_RQVD01000015.1 | SEQF4130.1_01623 | open | 1335 [NA] | 444 [AA] | 40119-41453 | potE_2 | Putrescine transporter PotE |
1561 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01624 | open | 999 [NA] | 332 [AA] | 473-1471 | pta | Phosphate acetyltransferase |
1562 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01625 | open | 666 [NA] | 221 [AA] | 1660-2325 | hypothetical protein | |
1563 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01626 | open | 786 [NA] | 261 [AA] | 2546-3331 | Putative bifunctional phosphatasepeptidyl-prolyl cis-trans isomerase | |
1564 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01627 | open | 255 [NA] | 84 [AA] | 3342-3596 | hypothetical protein | |
1565 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01628 | open | 774 [NA] | 257 [AA] | 3621-4394 | hypothetical protein | |
1566 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01629 | open | 696 [NA] | 231 [AA] | 4552-5247 | hypothetical protein | |
1567 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01630 | open | 6246 [NA] | 2081 [AA] | 5409-11654 | hypothetical protein | |
1568 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01631 | open | 483 [NA] | 160 [AA] | 13263-13745 | hypothetical protein | |
1569 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01632 | open | 1011 [NA] | 336 [AA] | 14161-15171 | ilvC | Ketol-acid reductoisomerase (NADP(+)) |
1570 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01633 | open | 804 [NA] | 267 [AA] | 15334-16137 | ylmA | putative ABC transporter ATP-binding protein YlmA |
1571 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01634 | open | 495 [NA] | 164 [AA] | 16137-16631 | ilvH | Putative acetolactate synthase small subunit |
1572 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01635 | open | 1722 [NA] | 573 [AA] | 16624-18345 | ilvB | Acetolactate synthase large subunit |
1573 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01636 | open | 1227 [NA] | 408 [AA] | 18378-19604 | tdcB | L-threonine ammonia-lyase |
1574 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01637 | open | 1671 [NA] | 556 [AA] | 19687-21357 | ilvD | Dihydroxy-acid dehydratase |
1575 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01638 | open | 1335 [NA] | 444 [AA] | 22334-23668 | gltD | Glutamate synthase [NADPH] small chain |
1576 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01639 | open | 1263 [NA] | 420 [AA] | 23936-25198 | hypothetical protein | |
1577 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01640 | open | 816 [NA] | 271 [AA] | 25598-26413 | metQ_3 | D-methionine-binding lipoprotein MetQ |
1578 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01641 | open | 1344 [NA] | 447 [AA] | 26646-27989 | hypothetical protein | |
1579 | SEQF4130.1_RQVD01000016.1 | SEQF4130.1_01642 | open | 1488 [NA] | 495 [AA] | 28078-29565 | hypothetical protein | |
1580 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01644 | open | 138 [NA] | 45 [AA] | 702-839 | hypothetical protein | |
1581 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01645 | open | 1128 [NA] | 375 [AA] | 839-1966 | mdtA | Multidrug resistance protein MdtA |
1582 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01646 | open | 2865 [NA] | 954 [AA] | 2781-5645 | recF_3 | DNA replication and repair protein RecF |
1583 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01647 | open | 1245 [NA] | 414 [AA] | 5635-6879 | hypothetical protein | |
1584 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01648 | open | 1452 [NA] | 483 [AA] | 6881-8332 | gabR | HTH-type transcriptional regulatory protein GabR |
1585 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01649 | open | 1416 [NA] | 471 [AA] | 8635-10050 | hypothetical protein | |
1586 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01650 | open | 1017 [NA] | 338 [AA] | 10557-11573 | bioB_2 | Biotin synthase |
1587 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01651 | open | 1875 [NA] | 624 [AA] | 11739-13613 | hypothetical protein | |
1588 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01652 | open | 1317 [NA] | 438 [AA] | 13923-15239 | hypothetical protein | |
1589 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01653 | open | 1230 [NA] | 409 [AA] | 15236-16465 | hypothetical protein | |
1590 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01654 | open | 831 [NA] | 276 [AA] | 16466-17296 | hypothetical protein | |
1591 | SEQF4130.1_RQVD01000017.1 | SEQF4130.1_01655 | open | 12003 [NA] | 4000 [AA] | 17872-29874 | hypothetical protein | |
1592 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01656 | open | 1332 [NA] | 443 [AA] | 180-1511 | brnQ_2 | Branched-chain amino acid transport system 2 carrier protein |
1593 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01657 | open | 2004 [NA] | 667 [AA] | 1722-3725 | ynfE | Putative dimethyl sulfoxide reductase chain YnfE |
1594 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01658 | open | 228 [NA] | 75 [AA] | 3737-3964 | hypothetical protein | |
1595 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01659 | open | 435 [NA] | 144 [AA] | 4231-4665 | dps | DNA protection during starvation protein |
1596 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01660 | open | 786 [NA] | 261 [AA] | 4934-5719 | yfcA_2 | putative membrane transporter protein YfcA |
1597 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01661 | open | 975 [NA] | 324 [AA] | 5723-6697 | hypothetical protein | |
1598 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01662 | open | 1206 [NA] | 401 [AA] | 6717-7922 | dinB1 | DNA polymerase IV 1 |
1599 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01663 | open | 351 [NA] | 116 [AA] | 7924-8274 | hypothetical protein | |
1600 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01664 | open | 564 [NA] | 187 [AA] | 8582-9145 | ahpC | Alkyl hydroperoxide reductase C |
1601 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01665 | open | 1242 [NA] | 413 [AA] | 9295-10536 | hypothetical protein | |
1602 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01666 | open | 1119 [NA] | 372 [AA] | 10663-11781 | menC | o-succinylbenzoate synthase |
1603 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01667 | open | 831 [NA] | 276 [AA] | 11810-12640 | menH | 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase |
1604 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01668 | open | 1635 [NA] | 544 [AA] | 12642-14276 | menD | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase |
1605 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01669 | open | 1143 [NA] | 380 [AA] | 14295-15437 | menF | Isochorismate synthase MenF |
1606 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01670 | open | 1671 [NA] | 556 [AA] | 15644-17314 | cysN | Sulfate adenylyltransferase subunit 1 |
1607 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01671 | open | 900 [NA] | 299 [AA] | 17314-18213 | cysD | Sulfate adenylyltransferase subunit 2 |
1608 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01672 | open | 315 [NA] | 104 [AA] | 18224-18538 | aprB | Adenylylsulfate reductase subunit beta |
1609 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01673 | open | 1869 [NA] | 622 [AA] | 18522-20390 | aprA | Adenylylsulfate reductase subunit alpha |
1610 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01674 | open | 1062 [NA] | 353 [AA] | 20471-21532 | btuD_3 | Vitamin B12 import ATP-binding protein BtuD |
1611 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01675 | open | 828 [NA] | 275 [AA] | 21568-22395 | cysW | Sulfate transport system permease protein CysW |
1612 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01676 | open | 876 [NA] | 291 [AA] | 22403-23278 | cysT | Sulfate transport system permease protein CysT |
1613 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01677 | open | 1026 [NA] | 341 [AA] | 23259-24284 | sbp | Sulfate-binding protein |
1614 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01678 | open | 924 [NA] | 307 [AA] | 24527-25450 | cysK1 | O-acetylserine sulfhydrylase |
1615 | SEQF4130.1_RQVD01000018.1 | SEQF4130.1_01679 | open | 729 [NA] | 242 [AA] | 25922-26650 | hypothetical protein | |
1616 | SEQF4130.1_RQVD01000019.1 | SEQF4130.1_01680 | open | 375 [NA] | 124 [AA] | 892-1266 | hypothetical protein | |
1617 | SEQF4130.1_RQVD01000019.1 | SEQF4130.1_01681 | open | 981 [NA] | 326 [AA] | 11976-12956 | hypothetical protein | |
1618 | SEQF4130.1_RQVD01000022.1 | SEQF4130.1_01684 | open | 828 [NA] | 275 [AA] | 173-1000 | hypothetical protein | |
1619 | SEQF4130.1_RQVD01000022.1 | SEQF4130.1_01685 | open | 1602 [NA] | 533 [AA] | 1249-2850 | hypothetical protein | |
1620 | SEQF4130.1_RQVD01000022.1 | SEQF4130.1_01686 | open | 735 [NA] | 244 [AA] | 2978-3712 | hypothetical protein | |
1621 | SEQF4130.1_RQVD01000024.1 | SEQF4130.1_01687 | open | 1125 [NA] | 374 [AA] | 31-1155 | IS256 family transposase ISDin1 | |
1622 | SEQF4130.1_RQVD01000025.1 | SEQF4130.1_01688 | open | 429 [NA] | 142 [AA] | 165-593 | hypothetical protein |