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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Lactobacillus plantarum IPLA88 (SEQF2525.1)
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NCBI Annotation for SEQF2525.1
Genome selected: Lactobacillus plantarum IPLA88
Contigs:208 Bases:3254055 bps
CDS:3116 rRNA:2
tmRNA:0 tRNA:47
Annotation Table [page:7]
Number of Records Found: 3116 [7 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
3001 ASJE01000181.1 EPD22960.1 open 198 [NA] 65 [AA] 28978-29175 L103_15439 Hypothetical protein
3002 ASJE01000181.1 EPD22961.1 open 528 [NA] 175 [AA] 29271-29798 L103_15444 methyltransferase, SAM-dependent
3003 ASJE01000181.1 EPD22962.1 open 651 [NA] 216 [AA] 29867-30517 L103_15449 phosphatase
3004 ASJE01000181.1 EPD22963.1 open 2427 [NA] 808 [AA] 31013-33439 L103_15454 leucyl-tRNA ligase
3005 ASJE01000181.1 EPD22964.1 open 1671 [NA] 556 [AA] 33963-35633 L103_15459 polysaccharide export protein
3006 ASJE01000181.1 EPD22965.1 open 741 [NA] 246 [AA] 35641-36381 L103_15464 Pseudouridine synthase
3007 ASJE01000181.1 EPD22966.1 open 837 [NA] 278 [AA] 36518-37354 L103_15469 ADP-dependent (S)-NAD(P)H-hydrate dehydratase
3008 ASJE01000181.1 EPD22967.1 open 1404 [NA] 467 [AA] 37481-38884 L103_15474 dipeptidase PepV
3009 ASJE01000181.1 EPD22968.1 open 507 [NA] 168 [AA] 38911-39417 L103_15479 Nucleotide-binding protein, universal stress protein UspA family
3010 ASJE01000181.1 EPD22969.1 open 1101 [NA] 366 [AA] 39759-40859 L103_15484 glycerol-3-phosphate ABC transporter ATP-binding protein
3011 ASJE01000181.1 EPD22970.1 open 966 [NA] 321 [AA] 40834-41799 L103_15489 Glycerol-3-phosphate ABC transporter, permease protein
3012 ASJE01000181.1 EPD22971.1 open 843 [NA] 280 [AA] 41799-42641 L103_15494 Glycerol-3-phosphate ABC transporter, permease protein
3013 ASJE01000181.1 EPD22972.1 open 1353 [NA] 450 [AA] 42638-43990 L103_15499 glycerol-3-phosphate ABC transporter, substrate binding protein
3014 ASJE01000181.1 EPD22973.1 open 687 [NA] 228 [AA] 44011-44697 L103_15504 glycerophosphodiester phosphodiesterase
3015 ASJE01000181.1 EPD22974.1 open 648 [NA] 215 [AA] 44879-45526 L103_15509 deoxyguanosine kinase
3016 ASJE01000181.1 EPD22975.1 open 381 [NA] 126 [AA] 45631-46011 L103_15514 large-conductance mechanosensitive channel
3017 ASJE01000181.1 EPD22976.1 open 2952 [NA] 983 [AA] 46515-49466 L103_15519 integral membrane protein
3018 ASJE01000181.1 EPD22977.1 open 168 [NA] 55 [AA] 49865-50032 L103_15524 hypothetical protein
3019 ASJE01000181.1 EPD22978.1 open 738 [NA] 245 [AA] 50053-50790 L103_15529 ABC transporter, permease protein
3020 ASJE01000181.1 EPD22979.1 open 858 [NA] 285 [AA] 50787-51644 L103_15534 ABC superfamily ATP binding cassette transporter, ABC protein
3021 ASJE01000181.1 EPD22980.1 open 987 [NA] 328 [AA] 51795-52781 L103_15539 bifunctional protein: ABC transporter ATP-binding protein, transcription regulator, LytR family
3022 ASJE01000182.1 EPD22931.1 open 426 [NA] 141 [AA] 771-1196 L103_15550 lipoprotein precursor
3023 ASJE01000182.1 EPD22932.1 open 120 [NA] 39 [AA] 1209-1328 L103_15555 Hypothetical protein
3024 ASJE01000182.1 EPD22933.1 open 1014 [NA] 337 [AA] 1361-2374 L103_15560 Extracellular protein, membrane-anchored
3025 ASJE01000182.1 EPD22934.1 open 522 [NA] 173 [AA] 2480-3001 L103_15565 Teichoic acid glycosylation protein
3026 ASJE01000182.1 EPD22935.1 open 360 [NA] 119 [AA] 3101-3460 L103_15570 hypothetical protein
3027 ASJE01000182.1 EPD22936.1 open 1857 [NA] 618 [AA] 3533-5389 L103_15575 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
3028 ASJE01000182.1 EPD22937.1 open 2307 [NA] 768 [AA] 5403-7709 L103_15580 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
3029 ASJE01000182.1 EPD22938.1 open 1638 [NA] 545 [AA] 8598-10235 L103_15585 Hypothetical protein
3030 ASJE01000182.1 EPD22939.1 open 1176 [NA] 391 [AA] 10213-11388 L103_15590 sulfate adenylyltransferase
3031 ASJE01000182.1 EPD22940.1 open 624 [NA] 207 [AA] 11391-12014 L103_15595 adenylylsulfate kinase
3032 ASJE01000182.1 EPD22941.1 open 957 [NA] 318 [AA] 12004-12960 L103_15600 exopolyphosphatase
3033 ASJE01000182.1 EPD22942.1 open 1740 [NA] 579 [AA] 13181-14920 L103_15605 arylsulfate sulfotransferase
3034 ASJE01000184.1 EPD22930.1 open 279 [NA] 93 [AA] <1->280 L103_15612 relaxase/mobilization nuclease domain-containing protein
3035 ASJE01000185.1 EPD22929.1 open 228 [NA] 75 [AA] 161-388 L103_15617 hypothetical protein
3036 ASJE01000188.1 EPD22928.1 open 531 [NA] 177 [AA] <1->532 L103_15632 cell surface protein precursor
3037 ASJE01000192.1 EPD22926.1 open 1173 [NA] 390 [AA] 35-1207 L103_15639 ser/thr protein phosphatase
3038 ASJE01000192.1 EPD22927.1 open 159 [NA] 52 [AA] 1395-1553 L103_15644 transposase
3039 ASJE01000193.1 EPD22925.1 open 270 [NA] 90 [AA] <1->271 L103_15649 plasmid replication initiator protein A
3040 ASJE01000194.1 EPD22914.1 open 447 [NA] 148 [AA] 84-530 L103_15654 hypothetical protein
3041 ASJE01000194.1 EPD22915.1 open 1527 [NA] 508 [AA] 768-2294 L103_15659 glycine betaine/carnitine/choline ABC transporter, substrate binding and permease
3042 ASJE01000194.1 EPD22916.1 open 972 [NA] 323 [AA] 2295-3266 L103_15664 Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein
3043 ASJE01000194.1 EPD22917.1 open 1332 [NA] 443 [AA] 3344-4675 L103_15669 glutathione reductase
3044 ASJE01000194.1 EPD22918.1 open 1518 [NA] 505 [AA] 5141-6658 L103_15674 glycerol kinase
3045 ASJE01000194.1 EPD22919.1 open 1830 [NA] 609 [AA] 6673-8502 L103_15679 Glycerol-3-phosphate dehydrogenase,FAD-dependent
3046 ASJE01000194.1 EPD22920.1 open 723 [NA] 240 [AA] 8517-9239 L103_15684 Glycerol uptake facilitator protein
3047 ASJE01000194.1 EPD22921.1 open 2349 [NA] 782 [AA] 9434-11782 L103_15689 cell surface protein precursor
3048 ASJE01000194.1 EPD22922.1 open 1749 [NA] 582 [AA] 11784-13532 L103_15694 hypothetical protein
3049 ASJE01000194.1 EPD22923.1 open 234 [NA] 77 [AA] 13538-13771 L103_15699 hypothetical protein
3050 ASJE01000194.1 EPD22924.1 open 918 [NA] 305 [AA] 14392-15309 L103_15704 hypothetical protein
3051 ASJE01000196.1 EPD22913.1 open 188 [NA] 62 [AA] <1-188 L103_15709 hypothetical protein
3052 ASJE01000197.1 EPD22912.1 open 339 [NA] 112 [AA] 74-412 L103_15714 hypothetical protein
3053 ASJE01000198.1 EPD22911.1 open 208 [NA] 69 [AA] <1->209 L103_15719 hypothetical protein
3054 ASJE01000199.1 EPD22909.1 open 117 [NA] 38 [AA] 4-120 L103_15724 Hypothetical protein
3055 ASJE01000199.1 EPD22910.1 open 201 [NA] 66 [AA] 193->395 L103_15729 hypothetical protein
3056 ASJE01000201.1 EPD22874.1 open 933 [NA] 311 [AA] <1-933 L103_15734 cell surface protein precursor
3057 ASJE01000201.1 EPD22875.1 open 762 [NA] 253 [AA] 1206-1967 L103_15739 cell surface hydrolase
3058 ASJE01000201.1 EPD22876.1 open 996 [NA] 331 [AA] 2091-3086 L103_15744 ferredoxin--NADP reductase
3059 ASJE01000201.1 EPD22877.1 open 264 [NA] 87 [AA] 3477-3740 L103_15749 hypothetical protein
3060 ASJE01000201.1 EPD22878.1 open 1794 [NA] 597 [AA] 4200-5993 L103_15754 Glycerophosphodiester phosphodiesterase
3061 ASJE01000201.1 EPD22879.1 open 2154 [NA] 717 [AA] 6376-8529 L103_15759 Sulfatase, alkaline phosphatase superfamily,membrane-bound protein
3062 ASJE01000201.1 EPD22880.1 open 426 [NA] 141 [AA] 8732-9157 L103_15764 GNAT family acetyltransferase
3063 ASJE01000201.1 EPD22881.1 open 2010 [NA] 669 [AA] 9519-11528 L103_15769 cell surface protein
3064 ASJE01000201.1 EPD22882.1 open 96 [NA] 31 [AA] 11735-11830 L103_15774 Hypothetical protein
3065 ASJE01000201.1 EPD22883.1 open 2685 [NA] 894 [AA] 11991-14675 L103_15779 integral membrane protein
3066 ASJE01000201.1 EPD22884.1 open 630 [NA] 209 [AA] 14828-15457 L103_15784 integral membrane protein
3067 ASJE01000201.1 EPD22885.1 open 219 [NA] 72 [AA] 15457-15675 L103_15789 Hypothetical protein
3068 ASJE01000201.1 EPD22886.1 open 954 [NA] 317 [AA] 15724-16677 L103_15794 choloylglycine hydrolase
3069 ASJE01000201.1 EPD22887.1 open 1062 [NA] 353 [AA] 16908-17969 L103_15799 aspartate-semialdehyde dehydrogenase
3070 ASJE01000201.1 EPD22888.1 open 516 [NA] 171 [AA] 18287-18802 L103_15804 Hypothetical protein
3071 ASJE01000201.1 EPD22889.1 open 831 [NA] 276 [AA] 18841-19671 L103_15809 Short-chain dehydrogenase/oxidoreductase
3072 ASJE01000201.1 EPD22890.1 open 510 [NA] 169 [AA] 19720-20229 L103_15814 Transcription regulator, MerR family protein
3073 ASJE01000201.1 EPD22891.1 open 348 [NA] 115 [AA] 20380-20727 L103_15819 Hypothetical protein
3074 ASJE01000201.1 EPD22892.1 open 909 [NA] 302 [AA] 20742-21650 L103_15824 Mg2+/Co2+ transport protein
3075 ASJE01000201.1 EPD22893.1 open 1164 [NA] 387 [AA] 21734-22897 L103_15829 membrane protein
3076 ASJE01000201.1 EPD22894.1 open 831 [NA] 276 [AA] 23124-23954 L103_15834 histidinol-phosphatase
3077 ASJE01000201.1 EPD22895.1 open 1152 [NA] 383 [AA] 24420-25571 L103_15839 histidine-tRNA synthetase
3078 ASJE01000201.1 EPD22896.1 open 657 [NA] 218 [AA] 25564-26220 L103_15844 ATP phosphoribosyltransferase
3079 ASJE01000201.1 EPD22897.1 open 1287 [NA] 428 [AA] 26220-27506 L103_15849 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase
3080 ASJE01000201.1 EPD22898.1 open 585 [NA] 194 [AA] 27579-28163 L103_15854 imidazoleglycerol-phosphate dehydratase
3081 ASJE01000201.1 EPD22899.1 open 627 [NA] 208 [AA] 28164-28790 L103_15859 imidazole glycerol phosphate synthase subunit HisH
3082 ASJE01000201.1 EPD22900.1 open 720 [NA] 239 [AA] 28771-29490 L103_15864 phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase
3083 ASJE01000201.1 EPD22901.1 open 759 [NA] 252 [AA] 29484-30242 L103_15869 imidazole glycerol phosphate synthase subunit HisF
3084 ASJE01000201.1 EPD22902.1 open 327 [NA] 108 [AA] 30239-30565 L103_15874 Phosphoribosyl-AMP cyclohydrolase
3085 ASJE01000201.1 EPD22903.1 open 321 [NA] 106 [AA] 30706-31026 L103_15879 phosphoribosyl-ATP pyrophosphatase
3086 ASJE01000201.1 EPD22904.1 open 1071 [NA] 356 [AA] 31038-32108 L103_15884 histidinol-phosphate aminotransferase
3087 ASJE01000201.1 EPD22905.1 open 555 [NA] 184 [AA] 32294-32848 L103_15889 O-acetyltransferase
3088 ASJE01000201.1 EPD22906.1 open 774 [NA] 257 [AA] 33024-33797 L103_15894 membrane protein
3089 ASJE01000201.1 EPD22907.1 open 861 [NA] 286 [AA] 33794-34654 L103_15899 3-hydroxyisobutyrate dehydrogenase
3090 ASJE01000201.1 EPD22908.1 open 138 [NA] 45 [AA] 35291-35428 L103_15904 Hypothetical protein
3091 ASJE01000202.1 EPD22861.1 open 2001 [NA] 666 [AA] 330-2330 L103_15909 ABC transporter, ATP-binding and permease protein
3092 ASJE01000202.1 EPD22862.1 open 3339 [NA] 1112 [AA] 2706-6044 L103_15914 cell surface protein precursor
3093 ASJE01000202.1 EPD22863.1 open 363 [NA] 120 [AA] 6257-6619 L103_15919 hypothetical protein
3094 ASJE01000202.1 EPD22864.1 open 837 [NA] 278 [AA] 6684-7520 L103_15924 Metallo-phosphoesterase
3095 ASJE01000202.1 EPD22865.1 open 315 [NA] 104 [AA] 7708-8022 L103_15929 hypothetical protein
3096 ASJE01000202.1 EPD22866.1 open 822 [NA] 273 [AA] 8153-8974 L103_15934 Transcription regulator, TetR family protein
3097 ASJE01000202.1 EPD22867.1 open 447 [NA] 148 [AA] 9177-9623 L103_15939 PTS system, cellobiose-specific EIIA component
3098 ASJE01000202.1 EPD22868.1 open 327 [NA] 108 [AA] 10076-10402 L103_15944 PTS system, cellobiose-specific EIIB component
3099 ASJE01000202.1 EPD22869.1 open 1473 [NA] 490 [AA] 10426-11898 L103_15949 PTS system, cellobiose-specific EIIC component
3100 ASJE01000202.1 EPD22870.1 open 1383 [NA] 460 [AA] 11898-13280 L103_15954 6-phospho-beta-glucosidase
3101 ASJE01000202.1 EPD22871.1 open 1020 [NA] 339 [AA] 13477-14496 L103_15959 NAD-dependent epimerase/dehydratase protein family
3102 ASJE01000202.1 EPD22872.1 open 444 [NA] 147 [AA] 14602-15045 L103_15964 Transcription regulator, MerR family protein
3103 ASJE01000202.1 EPD22873.1 open 615 [NA] 204 [AA] 15429-16043 L103_15969 extracellular transglycosylase, with LysM peptidoglycan binding domain
3104 ASJE01000204.1 EPD22859.1 open 1839 [NA] 612 [AA] 214-2052 L103_15978 cadmium-/zinc-/cobalt-transporting ATPase
3105 ASJE01000204.1 EPD22860.1 open 213 [NA] 70 [AA] 2096-2308 L103_15983 tyrosine recombinase
3106 ASJE01000207.1 EPD22858.1 open 245 [NA] 81 [AA] <1->247 L103_15988 relaxase/mobilization nuclease domain-containing protein
3107 ASJE01000208.1 EPD22848.1 open 1905 [NA] 634 [AA] 376-2280 L103_15993 Cadmium transporting P-type ATPase
3108 ASJE01000208.1 EPD22849.1 open 753 [NA] 250 [AA] 2434-3186 L103_15998 glycerol uptake facilitator protein
3109 ASJE01000208.1 EPD22850.1 open 321 [NA] 106 [AA] 3571-3891 L103_16003 Thioredoxin
3110 ASJE01000208.1 EPD22851.1 open 270 [NA] 89 [AA] 3915-4184 L103_16008 Hypothetical protein
3111 ASJE01000208.1 EPD22852.1 open 204 [NA] 67 [AA] 4284-4487 L103_16013 Hypothetical protein
3112 ASJE01000208.1 EPD22853.1 open 555 [NA] 184 [AA] 4615-5169 L103_16018 DNA-binding ferritin-like protein, DPS family
3113 ASJE01000208.1 EPD22854.1 open 219 [NA] 72 [AA] 5182-5400 L103_16023 heavy metal binding protein
3114 ASJE01000208.1 EPD22855.1 open 666 [NA] 221 [AA] 5604-6269 L103_16028 Transcription regulator, Crp family protein
3115 ASJE01000208.1 EPD22856.1 open 1917 [NA] 638 [AA] 6578-8494 L103_16033 Endopeptidase PepO
3116 ASJE01000208.1 EPD22857.1 open 225 [NA] 74 [AA] 8650-8874 L103_16038 hypothetical protein