Genome Explorer: Lactobacillus acidophilus 30SC (SEQF2108.1)
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NCBI Annotation for SEQF2108.1
| Genome selected: Lactobacillus acidophilus 30SC | |||
| Contigs: | 3 | Bases: | 2097766 bps |
| CDS: | 2059 | rRNA: | 12 |
| tmRNA: | 0 | tRNA: | 63 |
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| # | Molecule | PID | Genome Viewer |
NA (Length)(Seq) |
AA (Length)(Seq) |
Range | Gene | Gene Product |
|---|---|---|---|---|---|---|---|---|
| 2001 | CP002559.1 | ADZ08195.1 | open | 1308 [NA] | 435 [AA] | 2036935-2038242 | LAC30SC_10510 | xanthine-uracil permease |
| 2002 | CP002559.1 | ADZ08196.1 | open | 732 [NA] | 243 [AA] | 2038450-2039181 | LAC30SC_10515 | transcription regulator family protein |
| 2003 | CP002559.1 | ADZ08197.1 | open | 1308 [NA] | 435 [AA] | 2039362-2040669 | LAC30SC_10520 | Xanthine/uracil/vitamin C permease |
| 2004 | CP002559.1 | ADZ08198.1 | open | 1311 [NA] | 436 [AA] | 2040971-2042281 | LAC30SC_10525 | Xanthine/uracil/vitamin C permease |
| 2005 | CP002559.1 | ADZ08199.1 | open | 735 [NA] | 244 [AA] | 2042376-2043110 | LAC30SC_10530 | hypothetical protein |
| 2006 | CP002559.1 | ADZ08200.1 | open | 255 [NA] | 84 [AA] | 2043158-2043412 | LAC30SC_10535 | hypothetical protein |
| 2007 | CP002559.1 | ADZ08201.1 | open | 1629 [NA] | 542 [AA] | 2043779-2045407 | LAC30SC_10540 | oligopeptide ABC transporter substrate binding protein |
| 2008 | CP002559.1 | ADZ08202.1 | open | 1263 [NA] | 420 [AA] | 2045438-2046700 | LAC30SC_10545 | hypothetical protein |
| 2009 | CP002559.1 | ADZ08203.1 | open | 441 [NA] | 146 [AA] | 2046863-2047303 | LAC30SC_10550 | hypothetical protein |
| 2010 | CP002559.1 | ADZ08204.1 | open | 378 [NA] | 125 [AA] | 2047315-2047692 | LAC30SC_10555 | hypothetical protein |
| 2011 | CP002559.1 | ADZ08205.1 | open | 288 [NA] | 95 [AA] | 2047692-2047979 | LAC30SC_10560 | hypothetical protein |
| 2012 | CP002559.1 | ADZ08206.1 | open | 1929 [NA] | 642 [AA] | 2047979-2049907 | LAC30SC_10565 | copper-transporting ATPase |
| 2013 | CP002559.1 | ADZ08207.1 | open | 648 [NA] | 215 [AA] | 2049904-2050551 | LAC30SC_10570 | fnr/crp family transcriptional regulator |
| 2014 | CP002559.1 | ADZ08208.1 | open | 1065 [NA] | 354 [AA] | 2051045-2052109 | LAC30SC_10575 | major facilitator superfamily permease |
| 2015 | CP002559.1 | ADZ08209.1 | open | 456 [NA] | 151 [AA] | 2052178-2052633 | LAC30SC_10580 | hypothetical protein |
| 2016 | CP002559.1 | ADZ08210.1 | open | 1146 [NA] | 381 [AA] | 2052660-2053805 | LAC30SC_10585 | galactonate dehydratase |
| 2017 | CP002559.1 | ADZ08211.1 | open | 1428 [NA] | 475 [AA] | 2053807-2055234 | LAC30SC_10590 | PTS system galactitol-specific transporter subunit IIC |
| 2018 | CP002559.1 | ADZ08212.1 | open | 285 [NA] | 94 [AA] | 2055262-2055546 | LAC30SC_10595 | PTS system galactitol transporter subunit IIB |
| 2019 | CP002559.1 | ADZ08213.1 | open | 462 [NA] | 153 [AA] | 2055559-2056020 | LAC30SC_10600 | PTS system mannitol/fructose-specific transporter subunit IIA |
| 2020 | CP002559.1 | ADZ08214.1 | open | 618 [NA] | 205 [AA] | 2056036-2056653 | LAC30SC_10605 | 2-dehydro-3-deoxyphosphogluconate aldolase |
| 2021 | CP002559.1 | ADZ08215.1 | open | 2046 [NA] | 681 [AA] | 2056660-2058705 | LAC30SC_10610 | transcription antiterminator |
| 2022 | CP002559.1 | ADZ08216.1 | open | 312 [NA] | 103 [AA] | 2058850-2059161 | LAC30SC_10615 | putative transposase |
| 2023 | CP002559.1 | ADZ08217.1 | open | 1281 [NA] | 426 [AA] | 2059990-2061270 | LAC30SC_10620 | transposase |
| 2024 | CP002559.1 | ADZ08218.1 | open | 717 [NA] | 238 [AA] | 2061537-2062253 | LAC30SC_10625 | transposase |
| 2025 | CP002559.1 | ADZ08219.1 | open | 105 [NA] | 34 [AA] | 2062889-2062993 | LAC30SC_10630 | hypothetical protein |
| 2026 | CP002559.1 | ADZ08220.1 | open | 963 [NA] | 320 [AA] | 2062998-2063960 | LAC30SC_10635 | transposase |
| 2027 | CP002559.1 | ADZ08221.1 | open | 1227 [NA] | 408 [AA] | 2064316-2065542 | LAC30SC_10640 | transposase |
| 2028 | CP002559.1 | ADZ08222.1 | open | 153 [NA] | 50 [AA] | 2065797-2065949 | LAC30SC_10645 | hypothetical protein |
| 2029 | CP002559.1 | ADZ08223.1 | open | 1104 [NA] | 367 [AA] | 2066010-2067113 | LAC30SC_10650 | hypothetical protein |
| 2030 | CP002559.1 | ADZ08224.1 | open | 1560 [NA] | 519 [AA] | 2067210-2068769 | LAC30SC_10655 | voltage-gated chloride channel family protein |
| 2031 | CP002559.1 | ADZ08225.1 | open | 1404 [NA] | 467 [AA] | 2068874-2070277 | LAC30SC_10660 | 6-phosphogluconate dehydrogenase |
| 2032 | CP002559.1 | ADZ08226.1 | open | 1809 [NA] | 602 [AA] | 2070507-2072315 | LAC30SC_10665 | pyruvate oxidase |
| 2033 | CP002559.1 | ADZ08227.1 | open | 1899 [NA] | 632 [AA] | 2072691-2074589 | LAC30SC_10670 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
| 2034 | CP002559.1 | ADZ08228.1 | open | 1386 [NA] | 461 [AA] | 2074598-2075983 | LAC30SC_10675 | tRNA modification GTPase TrmE |
| 2035 | CP002559.1 | ADZ08229.1 | open | 897 [NA] | 298 [AA] | 2076094-2076990 | LAC30SC_10680 | stage III sporulation protein J |
| 2036 | CP002559.1 | ADZ08230.1 | open | 369 [NA] | 122 [AA] | 2076971-2077339 | LAC30SC_10685 | ribonuclease P |
| 2037 | CP002559.1 | ADZ08231.1 | open | 141 [NA] | 46 [AA] | 2077391-2077531 | LAC30SC_10690 | 50S ribosomal protein L34 |
| 2038 | CP002560.1 | ADZ08232.1 | open | 1521 [NA] | 506 [AA] | 5827-150 | LAC30SC_10845 | hypothetical protein |
| 2039 | CP002560.1 | ADZ08233.1 | open | 498 [NA] | 165 [AA] | 711-1208 | LAC30SC_10850 | hypothetical protein |
| 2040 | CP002560.1 | ADZ08234.1 | open | 738 [NA] | 245 [AA] | 1346-2083 | LAC30SC_10855 | erythromycin resistance protein |
| 2041 | CP002560.1 | ADZ08235.1 | open | 84 [NA] | 27 [AA] | 2208-2291 | LAC30SC_10860 | leader peptide |
| 2042 | CP002560.1 | ADZ08236.1 | open | 279 [NA] | 92 [AA] | 3031-3309 | LAC30SC_10865 | mobilization protein |
| 2043 | CP002560.1 | ADZ08237.1 | open | 1074 [NA] | 357 [AA] | 3391-4464 | LAC30SC_10870 | hypothetical protein |
| 2044 | CP002561.1 | ADZ08238.1 | open | 216 [NA] | 71 [AA] | 502-717 | LAC30SC_10880 | hypothetical protein |
| 2045 | CP002561.1 | ADZ08239.1 | open | 255 [NA] | 84 [AA] | 742-996 | LAC30SC_10885 | hypothetical protein |
| 2046 | CP002561.1 | ADZ08240.1 | open | 195 [NA] | 64 [AA] | 1078-1272 | LAC30SC_10890 | hypothetical protein |
| 2047 | CP002561.1 | ADZ08241.1 | open | 144 [NA] | 47 [AA] | 1273-1416 | LAC30SC_10895 | hypothetical protein |
| 2048 | CP002561.1 | ADZ08242.1 | open | 855 [NA] | 284 [AA] | 1440-2294 | LAC30SC_10900 | integrase/recombinase |
| 2049 | CP002561.1 | ADZ08243.1 | open | 330 [NA] | 109 [AA] | 2325-2654 | LAC30SC_10905 | putative single-stranded DNA-binding protein |
| 2050 | CP002561.1 | ADZ08244.1 | open | 1011 [NA] | 336 [AA] | 2873-3883 | LAC30SC_10910 | replication initiation factor family protein |
| 2051 | CP002561.1 | ADZ08245.1 | open | 762 [NA] | 253 [AA] | 3880-4641 | LAC30SC_10915 | hypothetical protein |
| 2052 | CP002561.1 | ADZ08246.1 | open | 477 [NA] | 158 [AA] | 4987-5463 | LAC30SC_10920 | hypothetical protein |
| 2053 | CP002561.1 | ADZ08247.1 | open | 999 [NA] | 332 [AA] | 5975-6973 | LAC30SC_10925 | restriction endonuclease (HaeIII) |
| 2054 | CP002561.1 | ADZ08248.1 | open | 1221 [NA] | 406 [AA] | 7075-8295 | LAC30SC_10930 | modification methylase BsuRI |
| 2055 | CP002561.1 | ADZ08249.1 | open | 480 [NA] | 159 [AA] | 8335-8814 | LAC30SC_10935 | very-short-patch-repair endonuclease |
| 2056 | CP002561.1 | ADZ08250.1 | open | 210 [NA] | 69 [AA] | 8836-9045 | LAC30SC_10940 | hypothetical protein |
| 2057 | CP002561.1 | ADZ08251.1 | open | 405 [NA] | 134 [AA] | 9190-9594 | LAC30SC_10945 | replication-associated protein RepC |
| 2058 | CP002561.1 | ADZ08252.1 | open | 888 [NA] | 295 [AA] | 9596-10483 | LAC30SC_10950 | replication-associated protein RepB |
| 2059 | CP002561.1 | ADZ08253.1 | open | 897 [NA] | 298 [AA] | 10890-11786 | LAC30SC_10955 | HNH nuclease |