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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Delftia acidovorans SPH-1 (SEQF1413.1)
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PROKKA Annotation for SEQF1413.1
Genome selected: Delftia acidovorans SPH-1
Contigs:1 Bases:6767514 bps
CDS:6115 rRNA:15
tmRNA:1 tRNA:83
Annotation Table [page:13]
Number of Records Found: 6115 [13 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
6001 SEQF1413.1_CP000884.1 SEQF1413.1_06185 open 1653 [NA] 550 [AA] 6628230-6629882 betA Oxygen-dependent choline dehydrogenase
6002 SEQF1413.1_CP000884.1 SEQF1413.1_06186 open 1329 [NA] 442 [AA] 6629931-6631259 abaF Fosfomycin resistance protein AbaF
6003 SEQF1413.1_CP000884.1 SEQF1413.1_06187 open 861 [NA] 286 [AA] 6631440-6632300 hypothetical protein
6004 SEQF1413.1_CP000884.1 SEQF1413.1_06188 open 966 [NA] 321 [AA] 6632323-6633288 dmlR_33 HTH-type transcriptional regulator DmlR
6005 SEQF1413.1_CP000884.1 SEQF1413.1_06189 open 1179 [NA] 392 [AA] 6633418-6634596 ydhP Inner membrane transport protein YdhP
6006 SEQF1413.1_CP000884.1 SEQF1413.1_06190 open 5955 [NA] 1984 [AA] 6634600-6640554 uvrA_2 UvrABC system protein A
6007 SEQF1413.1_CP000884.1 SEQF1413.1_06191 open 120 [NA] 39 [AA] 6640733-6640852 hypothetical protein
6008 SEQF1413.1_CP000884.1 SEQF1413.1_06192 open 984 [NA] 327 [AA] 6640990-6641973 Outer membrane porin protein 32
6009 SEQF1413.1_CP000884.1 SEQF1413.1_06193 open 1683 [NA] 560 [AA] 6642379-6644061 nanT Sialic acid transporter NanT
6010 SEQF1413.1_CP000884.1 SEQF1413.1_06194 open 309 [NA] 102 [AA] 6644365-6644673 yjcH Inner membrane protein YjcH
6011 SEQF1413.1_CP000884.1 SEQF1413.1_06195 open 1734 [NA] 577 [AA] 6644670-6646403 actP_3 Cationacetate symporter ActP
6012 SEQF1413.1_CP000884.1 SEQF1413.1_06196 open 636 [NA] 211 [AA] 6646621-6647256 hypothetical protein
6013 SEQF1413.1_CP000884.1 SEQF1413.1_06197 open 654 [NA] 217 [AA] 6647278-6647931 dinG_4 3-5 exonuclease DinG
6014 SEQF1413.1_CP000884.1 SEQF1413.1_06198 open 1854 [NA] 617 [AA] 6647928-6649781 hypothetical protein
6015 SEQF1413.1_CP000884.1 SEQF1413.1_06199 open 636 [NA] 211 [AA] 6649782-6650417 nsaD_2 2-hydroxychromene-2-carboxylate isomerase
6016 SEQF1413.1_CP000884.1 SEQF1413.1_06200 open 246 [NA] 81 [AA] 6650441-6650686 hypothetical protein
6017 SEQF1413.1_CP000884.1 SEQF1413.1_06201 open 504 [NA] 167 [AA] 6650683-6651186 hypothetical protein
6018 SEQF1413.1_CP000884.1 SEQF1413.1_06202 open 942 [NA] 313 [AA] 6651189-6652130 liuE 3-hydroxy-3-isohexenylglutaryl-CoAhydroxy-methylglutaryl-CoA lyase
6019 SEQF1413.1_CP000884.1 SEQF1413.1_06203 open 909 [NA] 302 [AA] 6652240-6653148 gltC_11 HTH-type transcriptional regulator GltC
6020 SEQF1413.1_CP000884.1 SEQF1413.1_06204 open 963 [NA] 320 [AA] 6653240-6654202 paaH_2 3-hydroxyadipyl-CoA dehydrogenase
6021 SEQF1413.1_CP000884.1 SEQF1413.1_06205 open 855 [NA] 284 [AA] 6654199-6655053 kce_4 3-keto-5-aminohexanoate cleavage enzyme
6022 SEQF1413.1_CP000884.1 SEQF1413.1_06206 open 1035 [NA] 344 [AA] 6655162-6656196 hypothetical protein
6023 SEQF1413.1_CP000884.1 SEQF1413.1_06207 open 921 [NA] 306 [AA] 6656206-6657126 ghrA_3 Glyoxylatehydroxypyruvate reductase A
6024 SEQF1413.1_CP000884.1 SEQF1413.1_06208 open 2019 [NA] 672 [AA] 6657197-6659215 accA1_2 Acetyl-propionyl-coenzyme A carboxylase alpha chain
6025 SEQF1413.1_CP000884.1 SEQF1413.1_06209 open 750 [NA] 249 [AA] 6659267-6660016 hypothetical protein
6026 SEQF1413.1_CP000884.1 SEQF1413.1_06210 open 786 [NA] 261 [AA] 6660083-6660868 dpgD_2 Enoyl-CoA-hydratase
6027 SEQF1413.1_CP000884.1 SEQF1413.1_06211 open 1608 [NA] 535 [AA] 6660903-6662510 Methylmalonyl-CoA carboxyltransferase 12S subunit
6028 SEQF1413.1_CP000884.1 SEQF1413.1_06212 open 1734 [NA] 577 [AA] 6662603-6664336 hypothetical protein
6029 SEQF1413.1_CP000884.1 SEQF1413.1_06213 open 1719 [NA] 572 [AA] 6664381-6666099 fadD3_3 3-[(3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase
6030 SEQF1413.1_CP000884.1 SEQF1413.1_06214 open 1077 [NA] 358 [AA] 6666236-6667312 putative HTH-type transcriptional regulator
6031 SEQF1413.1_CP000884.1 SEQF1413.1_06215 open 666 [NA] 221 [AA] 6667388-6668053 hypothetical protein
6032 SEQF1413.1_CP000884.1 SEQF1413.1_06216 open 693 [NA] 230 [AA] 6668091-6668783 yieH 6-phosphogluconate phosphatase
6033 SEQF1413.1_CP000884.1 SEQF1413.1_06217 open 1053 [NA] 350 [AA] 6668883-6669935 hypothetical protein
6034 SEQF1413.1_CP000884.1 SEQF1413.1_06218 open 738 [NA] 245 [AA] 6670123-6670860 vraR Response regulator protein VraR
6035 SEQF1413.1_CP000884.1 SEQF1413.1_06219 open 1860 [NA] 619 [AA] 6670830-6672689 rcsC_20 Sensor histidine kinase RcsC
6036 SEQF1413.1_CP000884.1 SEQF1413.1_06220 open 414 [NA] 137 [AA] 6672673-6673086 hypothetical protein
6037 SEQF1413.1_CP000884.1 SEQF1413.1_06221 open 498 [NA] 165 [AA] 6673253-6673750 hypothetical protein
6038 SEQF1413.1_CP000884.1 SEQF1413.1_06222 open 792 [NA] 263 [AA] 6673772-6674563 2-(acetamidomethylene)succinate hydrolase
6039 SEQF1413.1_CP000884.1 SEQF1413.1_06223 open 1131 [NA] 376 [AA] 6674706-6675836 acdA_2 Acyl-CoA dehydrogenase
6040 SEQF1413.1_CP000884.1 SEQF1413.1_06224 open 663 [NA] 220 [AA] 6675903-6676565 hypothetical protein
6041 SEQF1413.1_CP000884.1 SEQF1413.1_06225 open 624 [NA] 207 [AA] 6676594-6677217 hypothetical protein
6042 SEQF1413.1_CP000884.1 SEQF1413.1_06226 open 1182 [NA] 393 [AA] 6677270-6678451 thlA Acetyl-CoA acetyltransferase
6043 SEQF1413.1_CP000884.1 SEQF1413.1_06227 open 1788 [NA] 595 [AA] 6678498-6680285 aceK Isocitrate dehydrogenase kinasephosphatase
6044 SEQF1413.1_CP000884.1 SEQF1413.1_06228 open 663 [NA] 220 [AA] 6680319-6680981 can Carbonic anhydrase 2
6045 SEQF1413.1_CP000884.1 SEQF1413.1_06229 open 1188 [NA] 395 [AA] 6681038-6682225 mmgC_5 Acyl-CoA dehydrogenase
6046 SEQF1413.1_CP000884.1 SEQF1413.1_06230 open 459 [NA] 152 [AA] 6682269-6682727 hypothetical protein
6047 SEQF1413.1_CP000884.1 SEQF1413.1_06231 open 402 [NA] 133 [AA] 6682764-6683165 hypothetical protein
6048 SEQF1413.1_CP000884.1 SEQF1413.1_06242 open 951 [NA] 316 [AA] 6694867-6695817 gshB Glutathione synthetase
6049 SEQF1413.1_CP000884.1 SEQF1413.1_06243 open 1182 [NA] 393 [AA] 6695898-6697079 ydcO_2 Inner membrane protein YdcO
6050 SEQF1413.1_CP000884.1 SEQF1413.1_06244 open 1884 [NA] 627 [AA] 6697130-6699013 kup_2 Low affinity potassium transport system protein kup
6051 SEQF1413.1_CP000884.1 SEQF1413.1_06245 open 1296 [NA] 431 [AA] 6699096-6700391 hypothetical protein
6052 SEQF1413.1_CP000884.1 SEQF1413.1_06246 open 1467 [NA] 488 [AA] 6700473-6701939 trkH Trk system potassium uptake protein TrkH
6053 SEQF1413.1_CP000884.1 SEQF1413.1_06247 open 1458 [NA] 485 [AA] 6701950-6703407 trkA Trk system potassium uptake protein TrkA
6054 SEQF1413.1_CP000884.1 SEQF1413.1_06248 open 1281 [NA] 426 [AA] 6703497-6704777 proA_2 Gamma-glutamyl phosphate reductase
6055 SEQF1413.1_CP000884.1 SEQF1413.1_06249 open 303 [NA] 100 [AA] 6704966-6705268 hypothetical protein
6056 SEQF1413.1_CP000884.1 SEQF1413.1_06250 open 1053 [NA] 350 [AA] 6705279-6706331 holA DNA polymerase III subunit delta
6057 SEQF1413.1_CP000884.1 SEQF1413.1_06251 open 507 [NA] 168 [AA] 6706337-6706843 lptE LPS-assembly lipoprotein LptE
6058 SEQF1413.1_CP000884.1 SEQF1413.1_06252 open 2736 [NA] 911 [AA] 6706888-6709623 leuS Leucine--tRNA ligase
6059 SEQF1413.1_CP000884.1 SEQF1413.1_06253 open 1215 [NA] 404 [AA] 6709986-6711200 ybdG Miniconductance mechanosensitive channel YbdG
6060 SEQF1413.1_CP000884.1 SEQF1413.1_06254 open 480 [NA] 159 [AA] 6711228-6711707 tolR Tol-Pal system protein TolR
6061 SEQF1413.1_CP000884.1 SEQF1413.1_06255 open 735 [NA] 244 [AA] 6711732-6712466 tolQ_4 Tol-Pal system protein TolQ
6062 SEQF1413.1_CP000884.1 SEQF1413.1_06256 open 837 [NA] 278 [AA] 6712531-6713367 dapB 4-hydroxy-tetrahydrodipicolinate reductase
6063 SEQF1413.1_CP000884.1 SEQF1413.1_06257 open 510 [NA] 169 [AA] 6713492-6714001 bamE Outer membrane protein assembly factor BamE
6064 SEQF1413.1_CP000884.1 SEQF1413.1_06258 open 468 [NA] 155 [AA] 6714156-6714623 fur_2 Ferric uptake regulation protein
6065 SEQF1413.1_CP000884.1 SEQF1413.1_06259 open 1578 [NA] 525 [AA] 6714767-6716344 hypothetical protein
6066 SEQF1413.1_CP000884.1 SEQF1413.1_06260 open 1215 [NA] 404 [AA] 6716362-6717576 hypothetical protein
6067 SEQF1413.1_CP000884.1 SEQF1413.1_06261 open 942 [NA] 313 [AA] 6717585-6718526 sigJ ECF RNA polymerase sigma factor SigJ
6068 SEQF1413.1_CP000884.1 SEQF1413.1_06262 open 492 [NA] 163 [AA] 6718597-6719088 nudJ Phosphatase NudJ
6069 SEQF1413.1_CP000884.1 SEQF1413.1_06263 open 525 [NA] 174 [AA] 6719186-6719710 hypothetical protein
6070 SEQF1413.1_CP000884.1 SEQF1413.1_06264 open 1002 [NA] 333 [AA] 6719805-6720806 putative cyclic di-GMP phosphodiesterase
6071 SEQF1413.1_CP000884.1 SEQF1413.1_06265 open 597 [NA] 198 [AA] 6720803-6721399 hypothetical protein
6072 SEQF1413.1_CP000884.1 SEQF1413.1_06266 open 3135 [NA] 1044 [AA] 6721439-6724573 rcsC_21 Sensor histidine kinase RcsC
6073 SEQF1413.1_CP000884.1 SEQF1413.1_06267 open 258 [NA] 85 [AA] 6724724-6724981 hypothetical protein
6074 SEQF1413.1_CP000884.1 SEQF1413.1_06268 open 105 [NA] 34 [AA] 6725001-6725105 hypothetical protein
6075 SEQF1413.1_CP000884.1 SEQF1413.1_06269 open 969 [NA] 322 [AA] 6725403-6726371 hypothetical protein
6076 SEQF1413.1_CP000884.1 SEQF1413.1_06270 open 1359 [NA] 452 [AA] 6726617-6727975 bauA Beta-alanine--pyruvate aminotransferase
6077 SEQF1413.1_CP000884.1 SEQF1413.1_06271 open 1017 [NA] 338 [AA] 6728055-6729071 hypothetical protein
6078 SEQF1413.1_CP000884.1 SEQF1413.1_06272 open 1017 [NA] 338 [AA] 6729184-6730200 nanR_3 HTH-type transcriptional repressor NanR
6079 SEQF1413.1_CP000884.1 SEQF1413.1_06273 open 1206 [NA] 401 [AA] 6730445-6731650 hypothetical protein
6080 SEQF1413.1_CP000884.1 SEQF1413.1_06274 open 861 [NA] 286 [AA] 6731847-6732707 livH_14 High-affinity branched-chain amino acid transport system permease protein LivH
6081 SEQF1413.1_CP000884.1 SEQF1413.1_06275 open 993 [NA] 330 [AA] 6732713-6733705 hypothetical protein
6082 SEQF1413.1_CP000884.1 SEQF1413.1_06276 open 780 [NA] 259 [AA] 6733702-6734481 lptB_8 Lipopolysaccharide export system ATP-binding protein LptB
6083 SEQF1413.1_CP000884.1 SEQF1413.1_06277 open 711 [NA] 236 [AA] 6734478-6735188 livF_15 High-affinity branched-chain amino acid transport ATP-binding protein LivF
6084 SEQF1413.1_CP000884.1 SEQF1413.1_06278 open 1296 [NA] 431 [AA] 6735221-6736516 hyuC_2 N-carbamoyl-L-amino-acid hydrolase
6085 SEQF1413.1_CP000884.1 SEQF1413.1_06279 open 1467 [NA] 488 [AA] 6736513-6737979 hypothetical protein
6086 SEQF1413.1_CP000884.1 SEQF1413.1_06280 open 2310 [NA] 769 [AA] 6738188-6740497 maeB_2 NADP-dependent malic enzyme
6087 SEQF1413.1_CP000884.1 SEQF1413.1_06281 open 420 [NA] 139 [AA] 6740815-6741234 hypothetical protein
6088 SEQF1413.1_CP000884.1 SEQF1413.1_06282 open 426 [NA] 141 [AA] 6741384-6741809 hypothetical protein
6089 SEQF1413.1_CP000884.1 SEQF1413.1_06283 open 792 [NA] 263 [AA] 6741890-6742681 rsmA Ribosomal RNA small subunit methyltransferase A
6090 SEQF1413.1_CP000884.1 SEQF1413.1_06284 open 1428 [NA] 475 [AA] 6742734-6744161 surA_2 Chaperone SurA
6091 SEQF1413.1_CP000884.1 SEQF1413.1_06285 open 2325 [NA] 774 [AA] 6744203-6746527 lptD LPS-assembly protein LptD
6092 SEQF1413.1_CP000884.1 SEQF1413.1_06286 open 1098 [NA] 365 [AA] 6746731-6747828 amgK N-acetylmuramateN-acetylglucosamine kinase
6093 SEQF1413.1_CP000884.1 SEQF1413.1_06287 open 753 [NA] 250 [AA] 6747842-6748594 rsmE Ribosomal RNA small subunit methyltransferase E
6094 SEQF1413.1_CP000884.1 SEQF1413.1_06288 open 885 [NA] 294 [AA] 6748581-6749465 hypothetical protein
6095 SEQF1413.1_CP000884.1 SEQF1413.1_06289 open 1509 [NA] 502 [AA] 6749465-6750973 hypothetical protein
6096 SEQF1413.1_CP000884.1 SEQF1413.1_06290 open 498 [NA] 165 [AA] 6750985-6751482 hypothetical protein
6097 SEQF1413.1_CP000884.1 SEQF1413.1_06291 open 651 [NA] 216 [AA] 6751535-6752185 hypothetical protein
6098 SEQF1413.1_CP000884.1 SEQF1413.1_06292 open 1164 [NA] 387 [AA] 6752169-6753332 glpQ_2 Glycerophosphodiester phosphodiesterase
6099 SEQF1413.1_CP000884.1 SEQF1413.1_06293 open 585 [NA] 194 [AA] 6753405-6753989 metXA Bifunctional methionine biosynthesis protein MetXAMetW
6100 SEQF1413.1_CP000884.1 SEQF1413.1_06294 open 1122 [NA] 373 [AA] 6753986-6755107 metXS Homoserine O-succinyltransferase
6101 SEQF1413.1_CP000884.1 SEQF1413.1_06295 open 615 [NA] 204 [AA] 6755241-6755855 mneA Putative manganese exporter
6102 SEQF1413.1_CP000884.1 SEQF1413.1_06296 open 375 [NA] 124 [AA] 6756313-6756687 hypothetical protein
6103 SEQF1413.1_CP000884.1 SEQF1413.1_06297 open 531 [NA] 176 [AA] 6756943-6757473 hypothetical protein
6104 SEQF1413.1_CP000884.1 SEQF1413.1_06298 open 801 [NA] 266 [AA] 6757578-6758378 putative oxidoreductase
6105 SEQF1413.1_CP000884.1 SEQF1413.1_06299 open 618 [NA] 205 [AA] 6758421-6759038 lptC Lipopolysaccharide export system protein LptC
6106 SEQF1413.1_CP000884.1 SEQF1413.1_06300 open 561 [NA] 186 [AA] 6759035-6759595 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
6107 SEQF1413.1_CP000884.1 SEQF1413.1_06301 open 1002 [NA] 333 [AA] 6759595-6760596 kdsD Arabinose 5-phosphate isomerase KdsD
6108 SEQF1413.1_CP000884.1 SEQF1413.1_06302 open 558 [NA] 185 [AA] 6760694-6761251 apt Adenine phosphoribosyltransferase
6109 SEQF1413.1_CP000884.1 SEQF1413.1_06303 open 753 [NA] 250 [AA] 6761269-6762021 hypothetical protein
6110 SEQF1413.1_CP000884.1 SEQF1413.1_06304 open 480 [NA] 159 [AA] 6762198-6762677 hypothetical protein
6111 SEQF1413.1_CP000884.1 SEQF1413.1_06305 open 1422 [NA] 473 [AA] 6762896-6764317 mnmE tRNA modification GTPase MnmE
6112 SEQF1413.1_CP000884.1 SEQF1413.1_06306 open 1713 [NA] 570 [AA] 6764417-6766129 yidC Membrane protein insertase YidC
6113 SEQF1413.1_CP000884.1 SEQF1413.1_06307 open 291 [NA] 96 [AA] 6766126-6766416 yidD Putative membrane protein insertion efficiency factor
6114 SEQF1413.1_CP000884.1 SEQF1413.1_06308 open 471 [NA] 156 [AA] 6766413-6766883 hypothetical protein
6115 SEQF1413.1_CP000884.1 SEQF1413.1_06309 open 135 [NA] 44 [AA] 6766981-6767115 rpmH 50S ribosomal protein L34