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16S rRNA RefSeq: V15.23    Genomic RefSeq: V10.1
Genome Explorer: Agrobacterium tumefaciens 1D1609 (SEQF8732.1)
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NCBI Annotation for SEQF8732.1
Genome selected: Agrobacterium tumefaciens 1D1609
Contigs:5 Bases:5985137 bps
CDS:5630 rRNA:12
tmRNA:1 tRNA:53
Annotation Table [page:12]
Number of Records Found: 5630 [12 Pages]
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# Molecule PID Genome
Viewer
NA (Length)(Seq)
AA (Length)(Seq)
Range Gene Gene Product
5501 CP026928.1 AVH45555.1 open 1314 [NA] 437 [AA] 43757-45070 At1D1609_55240 hypothetical protein
5502 CP026928.1 AVH45556.1 open 1413 [NA] 470 [AA] 45142-46554 At1D1609_55250 UvrD/REP helicase domain protein
5503 CP026928.1 AVH45557.1 open 1731 [NA] 576 [AA] 46547-48277 At1D1609_55260 chromosome segregation protein SMC
5504 CP026928.1 AVH45558.1 open 183 [NA] 60 [AA] 48975-49157 At1D1609_55270 helicase
5505 CP026928.1 AVH45559.1 open 963 [NA] 320 [AA] 49369-50331 At1D1609_55280 hypothetical protein
5506 CP026928.1 AVH45560.1 open 603 [NA] 200 [AA] 50474-51076 At1D1609_55290 hypothetical protein
5507 CP026928.1 AVH45561.1 open 402 [NA] 133 [AA] 51092-51493 At1D1609_55300 hypothetical protein
5508 CP026928.1 AVH45562.1 open 5106 [NA] 1701 [AA] 51593-56698 At1D1609_55310 lactate dehydrogenase
5509 CP026928.1 AVH45563.1 open 873 [NA] 290 [AA] 56850-57722 At1D1609_55320 hypothetical protein
5510 CP026928.1 AVH45564.1 open 1764 [NA] 587 [AA] 57719-59482 At1D1609_55330 hypothetical protein
5511 CP026928.1 AVH45565.1 open 1845 [NA] 614 [AA] 59893-61737 At1D1609_55340 plasmid partitioning protein
5512 CP026928.1 AVH45566.1 open 471 [NA] 156 [AA] 61836-62306 At1D1609_55350 hypothetical protein
5513 CP026928.1 AVH45567.1 open 891 [NA] 296 [AA] 62303-63193 At1D1609_55360 hypothetical protein
5514 CP026928.1 AVH45568.1 open 381 [NA] 126 [AA] 63190-63570 At1D1609_55370 hypothetical protein
5515 CP026928.1 AVH45569.1 open 600 [NA] 199 [AA] 63961-64560 At1D1609_55380 hypothetical protein
5516 CP026928.1 AVH45570.1 open 468 [NA] 155 [AA] 65159-65626 At1D1609_55400 hypothetical protein
5517 CP026928.1 AVH45571.1 open 153 [NA] 50 [AA] 66168-66320 At1D1609_55410 ATPase AAA
5518 CP026928.1 AVH45572.1 open 633 [NA] 210 [AA] 66600-67232 At1D1609_55420 GntR family transcriptional regulator
5519 CP026928.1 AVH45573.1 open 1077 [NA] 358 [AA] 67330-68406 At1D1609_55430 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
5520 CP026928.1 AVH45574.1 open 1431 [NA] 476 [AA] 68408-69838 At1D1609_55440 aldehyde dehydrogenase
5521 CP026928.1 AVH45575.1 open 489 [NA] 162 [AA] 69835-70323 At1D1609_55450 hypothetical protein
5522 CP026928.1 AVH45576.1 open 1041 [NA] 346 [AA] 70434-71474 At1D1609_55460 hypothetical protein
5523 CP026928.1 AVH45577.1 open 801 [NA] 266 [AA] 71538-72338 At1D1609_55470 hypothetical protein
5524 CP026928.1 AVH45578.1 open 831 [NA] 276 [AA] 72335-73165 At1D1609_55480 hypothetical protein
5525 CP026928.1 AVH45579.1 open 837 [NA] 278 [AA] 73191-74027 At1D1609_55490 hypothetical protein
5526 CP026928.1 AVH45580.1 open 954 [NA] 317 [AA] 74024-74977 At1D1609_55500 3-hydroxybutyryl-CoA dehydrogenase
5527 CP026928.1 AVH45581.1 open 474 [NA] 157 [AA] 75818-76291 At1D1609_55510 purine-binding chemotaxis protein CheW
5528 CP026928.1 AVH45582.1 open 1794 [NA] 597 [AA] 76291-78084 At1D1609_55520 methyl-accepting chemotaxis protein
5529 CP026928.1 AVH45583.1 open 114 [NA] 37 [AA] 78118-78231 At1D1609_55530 hypothetical protein
5530 CP026928.1 AVH45584.1 open 732 [NA] 243 [AA] 78384-79115 At1D1609_55540 DNA-binding protein
5531 CP026928.1 AVH45585.1 open 297 [NA] 98 [AA] 79709-80005 At1D1609_55550 hypothetical protein
5532 CP026928.1 AVH45586.1 open 297 [NA] 98 [AA] 80547-80843 At1D1609_55560 hypothetical protein
5533 CP026928.1 AVH45587.1 open 528 [NA] 175 [AA] 80929-81456 At1D1609_55570 DNA damage-inducible protein DinB
5534 CP026928.1 AVH45588.1 open 636 [NA] 211 [AA] 81523-82158 At1D1609_55580 TetR family transcriptional regulator
5535 CP026928.1 AVH45589.1 open 147 [NA] 48 [AA] 82301-82447 At1D1609_55590 hypothetical protein
5536 CP026928.1 AVH45590.1 open 276 [NA] 91 [AA] 82490-82765 At1D1609_55600 hypothetical protein
5537 CP026928.1 AVH45591.1 open 1656 [NA] 551 [AA] 82774-84429 At1D1609_55610 transposase
5538 CP026928.1 AVH45592.1 open 348 [NA] 115 [AA] 84475-84822 At1D1609_55620 transposase
5539 CP026928.1 AVH45593.1 open 399 [NA] 132 [AA] 84819-85217 At1D1609_55630 transposase
5540 CP026928.1 AVH45594.1 open 1119 [NA] 372 [AA] 85534-86652 At1D1609_55640 transposase
5541 CP026928.1 AVH45595.1 open 2976 [NA] 991 [AA] 87361-90336 At1D1609_55650 transposase
5542 CP026928.1 AVH45596.1 open 297 [NA] 98 [AA] 90439-90735 At1D1609_55660 1,2-oxophytodienoate reductase
5543 CP026928.1 AVH45597.1 open 297 [NA] 98 [AA] 91037-91333 At1D1609_55665 hypothetical protein
5544 CP026928.1 AVH45598.1 open 288 [NA] 95 [AA] 91371-91658 At1D1609_55670 hypothetical protein
5545 CP026928.1 AVH45599.1 open 336 [NA] 111 [AA] 91962-92297 At1D1609_55680 hypothetical protein
5546 CP026928.1 AVH45600.1 open 282 [NA] 93 [AA] 92452-92733 At1D1609_55685 hypothetical protein
5547 CP026928.1 AVH45601.1 open 192 [NA] 63 [AA] 93516-93707 At1D1609_55690 hypothetical protein
5548 CP026928.1 AVH45602.1 open 924 [NA] 307 [AA] 94024-94947 At1D1609_55700 LysR family transcriptional regulator
5549 CP026928.1 AVH45603.1 open 1110 [NA] 369 [AA] 95276-96385 At1D1609_55710 spermidine/putrescine transport system substrate-binding protein
5550 CP026928.1 AVH45604.1 open 1011 [NA] 336 [AA] 96504-97514 At1D1609_55720 spermidine/putrescine transport system permease protein
5551 CP026928.1 AVH45605.1 open 795 [NA] 264 [AA] 97514-98308 At1D1609_55730 spermidine/putrescine transport system permease protein
5552 CP026928.1 AVH45606.1 open 1086 [NA] 361 [AA] 98308-99393 At1D1609_55740 spermidine/putrescine transport system ATP-binding protein
5553 CP026928.1 AVH45607.1 open 951 [NA] 316 [AA] 99604-100554 At1D1609_55750 NAD/NADP octopine/nopaline dehydrogenase
5554 CP026928.1 AVH45608.1 open 1203 [NA] 400 [AA] 100586-101788 At1D1609_55760 2-amino-3-ketobutyrate CoA ligase
5555 CP026928.1 AVH45609.1 open 975 [NA] 324 [AA] 101785-102759 At1D1609_55770 NAD-dependent epimerase
5556 CP026928.1 AVH45610.1 open 231 [NA] 76 [AA] 102809-103039 At1D1609_55780 D-amino acid dehydrogenase
5557 CP026928.1 AVH45611.1 open 675 [NA] 224 [AA] 103040-103714 At1D1609_55790 hypothetical protein
5558 CP026928.1 AVH45612.1 open 3084 [NA] 1027 [AA] 103799-106882 At1D1609_55800 hemolysin
5559 CP026928.1 AVH45613.1 open 1743 [NA] 580 [AA] 107124-108866 At1D1609_55810 type I secretion protein
5560 CP026928.1 AVH45614.1 open 1311 [NA] 436 [AA] 108863-110173 At1D1609_55820 HlyD family secretion protein
5561 CP026928.1 AVH45615.1 open 1008 [NA] 335 [AA] 110464-111471 At1D1609_55830 LacI family transcriptional regulator
5562 CP026928.1 AVH45616.1 open 1239 [NA] 412 [AA] 111519-112757 At1D1609_55840 multiple sugar transport system substrate-binding protein
5563 CP026928.1 AVH45617.1 open 918 [NA] 305 [AA] 112840-113757 At1D1609_55850 multiple sugar transport system permease protein
5564 CP026928.1 AVH45618.1 open 879 [NA] 292 [AA] 113754-114632 At1D1609_55860 multiple sugar transport system permease protein
5565 CP026928.1 AVH45619.1 open 1971 [NA] 656 [AA] 114632-116602 At1D1609_55870 hypothetical protein
5566 CP026928.1 AVH45620.1 open 1140 [NA] 379 [AA] 116599-117738 At1D1609_55880 lactose/L-arabinose transport system ATP-binding protein
5567 CP026928.1 AVH45621.1 open 978 [NA] 325 [AA] 118342-119319 At1D1609_55890 hypothetical protein
5568 CP026928.1 AVH45622.1 open 1923 [NA] 640 [AA] 119631-121553 At1D1609_55900 methyl-accepting chemotaxis protein
5569 CP026928.1 AVH45623.1 open 444 [NA] 147 [AA] 121592-122035 At1D1609_55910 purine-binding chemotaxis protein CheW
5570 CP026928.1 AVH45624.1 open 900 [NA] 299 [AA] 122220-123119 At1D1609_55920 hypothetical protein
5571 CP026928.1 AVH45625.1 open 186 [NA] 61 [AA] 124137-124322 At1D1609_55930 hypothetical protein
5572 CP026928.1 AVH45626.1 open 948 [NA] 315 [AA] 125055-126002 At1D1609_55940 hypothetical protein
5573 CP026928.1 AVH45627.1 open 963 [NA] 320 [AA] 126138-127100 At1D1609_55950 AraC family transcriptional regulator
5574 CP026928.1 AVH45628.1 open 507 [NA] 168 [AA] 127343-127849 At1D1609_55960 hypothetical protein
5575 CP026928.1 AVH45629.1 open 1362 [NA] 453 [AA] 127955-129316 At1D1609_55970 alkanesulfonate monooxygenase
5576 CP026928.1 AVH45630.1 open 1356 [NA] 451 [AA] 129359-130714 At1D1609_55980 MFS transporter
5577 CP026928.1 AVH45631.1 open 1470 [NA] 489 [AA] 130824-132293 At1D1609_55990 succinate-semialdehyde dehydrogenase
5578 CP026928.1 AVH45632.1 open 903 [NA] 300 [AA] 132295-133197 At1D1609_56000 LysR family transcriptional regulator
5579 CP026928.1 AVH45633.1 open 1179 [NA] 392 [AA] 133278-134456 At1D1609_56010 MFS transporter
5580 CP026928.1 AVH45634.1 open 654 [NA] 217 [AA] 134505-135158 At1D1609_56020 3,4-dihydroxy 2-butanone 4-phosphate synthase
5581 CP026928.1 AVH45635.1 open 732 [NA] 243 [AA] 135842-136573 At1D1609_56030 cyclohexyl-isocyanide hydratase
5582 CP026928.1 AVH45636.1 open 858 [NA] 285 [AA] 137287-138144 At1D1609_56040 hydroxylase
5583 CP026928.1 AVH45637.1 open 378 [NA] 125 [AA] 138232-138609 At1D1609_56045 transcriptional regulator
5584 CP026928.1 AVH45638.1 open 969 [NA] 322 [AA] 138715-139683 At1D1609_56050 AraC family transcriptional regulator
5585 CP026928.1 AVH45639.1 open 543 [NA] 180 [AA] 139786-140328 At1D1609_56060 Isochorismatase
5586 CP026928.1 AVH45640.1 open 873 [NA] 290 [AA] 140352-141224 At1D1609_56070 hypothetical protein
5587 CP026928.1 AVH45641.1 open 429 [NA] 142 [AA] 141851-142279 At1D1609_56080 endoribonuclease L-PSP
5588 CP026928.1 AVH45642.1 open 978 [NA] 325 [AA] 142444-143421 At1D1609_56090 AraC family transcriptional regulator
5589 CP026928.1 AVH45643.1 open 906 [NA] 301 [AA] 144208-145113 At1D1609_56100 transposase
5590 CP026928.1 AVH45644.1 open 330 [NA] 109 [AA] 145110-145439 At1D1609_56110 transposase
5591 CP026928.1 AVH45645.1 open 177 [NA] 58 [AA] 146333-146509 At1D1609_56120 helicase
5592 CP026928.1 AVH45646.1 open 1011 [NA] 336 [AA] 146733-147743 At1D1609_56130 hypothetical protein
5593 CP026928.1 AVH45647.1 open 603 [NA] 200 [AA] 147805-148407 At1D1609_56140 hypothetical protein
5594 CP026928.1 AVH45648.1 open 5085 [NA] 1694 [AA] 148499-153583 At1D1609_56150 lactate dehydrogenase
5595 CP026928.1 AVH45649.1 open 1434 [NA] 477 [AA] 153788-155221 At1D1609_56160 hypothetical protein
5596 CP026928.1 AVH45650.1 open 828 [NA] 275 [AA] 155205-156032 At1D1609_56170 hypothetical protein
5597 CP026928.1 AVH45651.1 open 129 [NA] 42 [AA] 156112-156240 At1D1609_56180 hypothetical protein
5598 CP026928.1 AVH45652.1 open 1722 [NA] 573 [AA] 156736-158457 At1D1609_56190 plasmid partitioning protein
5599 CP026928.1 AVH45653.1 open 588 [NA] 195 [AA] 158997-159584 At1D1609_56200 hypothetical protein
5600 CP026928.1 AVH45654.1 open 927 [NA] 308 [AA] 159870-160796 At1D1609_56210 antirestriction protein
5601 CP026928.1 AVH45655.1 open 177 [NA] 58 [AA] 160811-160987 At1D1609_56220 hypothetical protein
5602 CP026928.1 AVH45656.1 open 312 [NA] 103 [AA] 161443-161754 At1D1609_56230 hypothetical protein
5603 CP026928.1 AVH45657.1 open 438 [NA] 145 [AA] 161892-162329 At1D1609_56240 hypothetical protein
5604 CP026928.1 AVH45658.1 open 174 [NA] 57 [AA] 162883-163056 At1D1609_56250 hypothetical protein
5605 CP026928.1 AVH45659.1 open 450 [NA] 149 [AA] 163090-163539 At1D1609_56260 nuclease
5606 CP026928.1 AVH45660.1 open 261 [NA] 86 [AA] 163609-163869 At1D1609_56270 hypothetical protein
5607 CP026928.1 AVH45661.1 open 789 [NA] 262 [AA] 164057-164845 At1D1609_56280 competence protein
5608 CP026928.1 AVH45662.1 open 1908 [NA] 635 [AA] 165074-166981 At1D1609_56290 conjugal transfer protein TraG
5609 CP026928.1 AVH45663.1 open 216 [NA] 71 [AA] 166968-167183 At1D1609_56300 conjugal transfer protein TraD
5610 CP026928.1 AVH45664.1 open 309 [NA] 102 [AA] 167188-167496 At1D1609_56310 conjugal transfer protein TraC
5611 CP026928.1 AVH45665.1 open 3327 [NA] 1108 [AA] 167751-171077 At1D1609_56320 conjugal transfer protein TraA
5612 CP026928.1 AVH45666.1 open 543 [NA] 180 [AA] 171074-171616 At1D1609_56330 conjugal transfer protein TraF
5613 CP026928.1 AVH45667.1 open 1164 [NA] 387 [AA] 171606-172769 At1D1609_56340 conjugal transfer protein TraB
5614 CP026928.1 AVH45668.1 open 618 [NA] 205 [AA] 172786-173403 At1D1609_56350 conjugal transfer protein TraH
5615 CP026928.1 AVH45669.1 open 1566 [NA] 521 [AA] 173635-175200 At1D1609_56360 hypothetical protein
5616 CP026928.1 AVH45670.1 open 222 [NA] 73 [AA] 175314-175535 At1D1609_56370 transcriptional regulator
5617 CP026928.1 AVH45671.1 open 321 [NA] 106 [AA] 175749-176069 At1D1609_56380 transcriptional regulator
5618 CP026928.1 AVH45672.1 open 705 [NA] 234 [AA] 176073-176777 At1D1609_56390 transcriptional regulator
5619 CP026928.1 AVH45673.1 open 1296 [NA] 431 [AA] 177099-178394 At1D1609_56400 conjugal transfer protein TrbI
5620 CP026928.1 AVH45674.1 open 441 [NA] 146 [AA] 178406-178846 At1D1609_56410 conjugal transfer protein TrbH
5621 CP026928.1 AVH45675.1 open 813 [NA] 270 [AA] 178850-179662 At1D1609_56420 conjugal transfer protein TrbG
5622 CP026928.1 AVH45676.1 open 663 [NA] 220 [AA] 179680-180342 At1D1609_56430 conjugal transfer protein TrbF
5623 CP026928.1 AVH45677.1 open 1182 [NA] 393 [AA] 180362-181543 At1D1609_56440 conjugal transfer protein TrbL
5624 CP026928.1 AVH45678.1 open 201 [NA] 66 [AA] 181537-181737 At1D1609_56450 conjugal transfer protein TrbK
5625 CP026928.1 AVH45679.1 open 804 [NA] 267 [AA] 181734-182537 At1D1609_56460 conjugal transfer protein TrbJ
5626 CP026928.1 AVH45680.1 open 2457 [NA] 818 [AA] 182509-184965 At1D1609_56470 conjugal transfer protein TrbE
5627 CP026928.1 AVH45681.1 open 300 [NA] 99 [AA] 184976-185275 At1D1609_56480 conjugal transfer protein TrbD
5628 CP026928.1 AVH45682.1 open 384 [NA] 127 [AA] 185268-185651 At1D1609_56490 conjugal transfer protein TrbC
5629 CP026928.1 AVH45683.1 open 978 [NA] 325 [AA] 185641-186618 At1D1609_56500 conjugal transfer protein TrbB
5630 CP026928.1 AVH45684.1 open 624 [NA] 207 [AA] 186629-187252 At1D1609_56510 autoinducer synthesis protein